Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 6.9e-212 740.3 367 100.0
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.7e-210 735.7 367 99.5
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.5e-206 722.6 367 97.8
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.3e-181 639.8 374 86.1
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 3.8e-178 628.2 373 84.5
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 7.1e-148 527.7 352 73.0
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.2e-147 526.9 347 75.5
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 3.5e-147 525.4 381 71.1
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.6e-147 525.0 373 71.8
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 7.8e-147 524.2 375 72.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 7.8e-147 524.2 359 72.7
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 1.0e-146 523.9 380 70.8
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.3e-146 523.5 357 72.0
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.0e-146 522.3 374 71.4
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.9e-146 521.9 357 71.4
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 4.3e-145 518.5 357 72.3
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 4.3e-145 518.5 371 70.4
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 7.3e-145 517.7 382 69.1
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 1.6e-144 516.5 359 72.7
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.8e-144 515.8 358 71.2
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 3.6e-144 515.4 374 71.7
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 3.6e-144 515.4 371 69.3
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 4.7e-144 515.0 340 74.4
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 6.2e-144 514.6 365 71.5
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.1e-143 513.8 389 67.9
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.1e-143 513.8 354 71.2
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.8e-143 513.1 382 68.3
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 1.8e-143 513.1 377 68.4
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 3.1e-143 512.3 367 68.7
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 3.1e-143 512.3 291 82.5
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 3.1e-143 512.3 370 70.0
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 4.0e-143 511.9 310 79.7
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.5e-142 510.0 311 77.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 2.6e-142 509.2 324 76.5
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 2.6e-142 509.2 309 79.3
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 3.4e-142 508.8 357 70.6
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 3.4e-142 508.8 354 72.0
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 4.4e-142 508.4 351 71.2
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 5.8e-142 508.1 343 72.6
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 7.6e-142 507.7 355 73.0
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 7.6e-142 507.7 380 68.9
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 7.6e-142 507.7 377 69.0
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 9.9e-142 507.3 301 80.7
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.3e-141 506.9 346 73.1
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 1.3e-141 506.9 372 70.7
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 2.2e-141 506.1 320 78.1
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 3.8e-141 505.4 338 71.6
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 8.4e-141 504.2 369 71.8
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 1.1e-140 503.8 430 61.9
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.9e-140 503.1 339 74.3
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.9e-140 503.1 339 74.3
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.9e-140 503.1 369 68.3
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.4e-140 502.7 339 74.3
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 3.2e-140 502.3 300 77.0
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 3.2e-140 502.3 300 77.0
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 4.2e-140 501.9 312 77.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 5.4e-140 501.5 339 74.0
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 9.3e-140 500.7 366 71.6
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.3e-140 500.7 366 70.5
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.2e-139 500.4 373 68.9
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.2e-139 500.4 367 70.3
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 2.1e-139 499.6 384 67.4
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.1e-139 499.6 373 67.3
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 3.5e-139 498.8 313 74.8
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 4.6e-139 498.4 371 66.6
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 4.6e-139 498.4 355 71.5
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 7.8e-139 497.7 313 74.4
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 7.8e-139 497.7 367 69.8
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 1.0e-138 497.3 364 67.0
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.0e-138 497.3 361 67.3
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.7e-138 496.5 313 74.1
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 5.1e-138 495.0 347 71.8
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 6.6e-138 494.6 313 75.1
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 8.7e-138 494.2 298 76.2
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 8.7e-138 494.2 314 72.3
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 8.7e-138 494.2 344 71.5
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.5e-137 493.4 360 70.3
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 1.5e-137 493.4 374 67.1
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 1.9e-137 493.0 291 80.4
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 3.3e-137 492.3 361 65.9
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 3.3e-137 492.3 343 70.0
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 4.3e-137 491.9 373 67.3
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 2.1e-136 489.6 311 77.8
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 3.1e-135 485.7 376 67.0
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 4.0e-135 485.3 368 67.1
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 5.3e-135 485.0 381 66.4
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 6.9e-135 484.6 370 66.2
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.5e-134 483.4 302 75.2
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 9.9e-134 480.7 347 67.4
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 7.1e-132 474.6 430 60.2
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.8e-130 469.9 357 66.7
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.3e-130 469.5 387 64.6
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 1.1e-129 467.2 374 65.5
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 7.4e-129 464.5 357 65.8
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 7.4e-129 464.5 436 60.8
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.6e-126 456.1 279 77.8
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 3.8e-125 452.2 305 73.8
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.1e-121 440.7 291 70.4
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.3e-121 439.1 319 69.0
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 1.2e-118 430.6 308 66.9
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.0e-118 429.9 291 68.0
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 4.5e-118 428.7 293 68.3
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 6.5e-117 424.9 355 59.4
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 5.5e-116 421.8 357 59.4
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.2e-115 420.6 291 67.4
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 2.3e-114 416.4 229 86.0
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 1.7e-96 357.1 312 62.2
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 7.7e-94 348.2 182 87.9
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 7.2e-92 341.7 304 56.2
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 1.2e-83 314.3 267 65.2
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.7e-80 302.8 263 61.2
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.4e-79 300.8 264 61.7
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 4.1e-79 299.3 215 64.2
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 9.1e-79 298.1 246 64.6
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.5e-76 290.8 236 65.3
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.0e-73 280.4 339 49.9
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.4e-47 193.7 242 47.5
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 3.5e-22 110.2 93 57.0
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 7.8e-22 109.0 150 48.7
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.0e-21 108.6 144 50.0
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 8.4e-16 89.0 63 65.1
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 6.9e-10 69.3 36 80.6


User provided reference genes

Program Settings