Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.8e-128 462.6 235 100.0
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.5e-127 459.5 235 99.6
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 6.6e-115 417.5 214 97.2
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 4.2e-93 345.1 237 77.6
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 7.4e-90 334.3 245 74.7
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 1.3e-89 333.6 231 76.2
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 2.8e-89 332.4 243 74.1
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 2.2e-86 322.8 234 74.8
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.7e-76 289.3 238 67.6
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 5.1e-75 285.0 236 64.8
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 5.1e-75 285.0 237 64.1
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 5.3e-72 275.0 220 65.9
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 9.0e-72 274.2 238 65.1
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.5e-71 273.5 254 62.6
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.0e-70 270.8 245 63.7
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 3.8e-70 268.9 239 64.0
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 2.5e-69 266.2 234 62.0
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 4.2e-69 265.4 233 64.8
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.8e-67 260.0 243 59.3
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 2.3e-67 259.6 236 61.0
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 2.5e-66 256.1 236 60.2
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 2.8e-65 252.7 219 58.9
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 1.1e-64 250.8 236 61.4
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 2.4e-64 249.6 234 56.8
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 3.1e-64 249.2 221 62.0
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 9.0e-64 247.7 221 60.6
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.2e-63 247.3 238 60.1
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.2e-63 247.3 242 58.7
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.5e-63 246.9 226 61.9
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 7.7e-63 244.6 245 57.6
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.3e-62 243.8 243 58.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.7e-62 243.4 245 58.8
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 3.8e-62 242.3 234 56.8
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.8e-62 242.3 234 59.4
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 5.0e-62 241.9 243 58.4
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 8.5e-62 241.1 243 58.4
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.1e-61 240.7 238 57.1
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.1e-61 240.7 242 58.7
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.4e-61 240.4 247 58.7
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 4.2e-61 238.8 219 60.7
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 9.4e-61 237.7 208 63.0
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 2.1e-60 236.5 224 59.4
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 6.1e-60 235.0 228 61.0
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 6.1e-60 235.0 218 61.0
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.0e-59 234.2 237 58.2
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 1.4e-59 233.8 206 62.1
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.4e-59 233.8 247 57.1
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.8e-59 233.4 231 58.0
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 3.0e-59 232.6 229 57.6
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 3.9e-59 232.3 242 57.0
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 3.9e-59 232.3 235 54.9
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 6.7e-59 231.5 209 62.2
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 8.8e-59 231.1 242 56.6
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.1e-58 230.7 238 54.2
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.1e-58 230.7 239 56.9
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 2.5e-58 229.6 219 60.7
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 4.3e-58 228.8 217 60.8
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 5.7e-58 228.4 205 60.5
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 5.7e-58 228.4 237 55.3
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 1.7e-57 226.9 219 56.2
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.7e-57 226.9 231 58.4
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 1.1e-56 224.2 237 57.8
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.4e-56 223.8 224 58.9
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 2.4e-56 223.0 187 63.1
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 4.1e-56 222.2 194 62.4
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 5.3e-56 221.9 228 53.1
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 6.9e-56 221.5 218 60.1
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 5.9e-55 218.4 240 55.0
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 7.7e-55 218.0 238 56.3
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.0e-54 217.6 236 55.1
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 2.2e-54 216.5 239 54.4
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 3.8e-54 215.7 238 54.2
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 3.8e-54 215.7 219 54.3
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 1.1e-53 214.2 221 54.8
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.4e-53 213.8 236 52.1
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.9e-53 213.4 212 54.7
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 3.2e-53 212.6 217 55.8
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 3.2e-53 212.6 229 52.8
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 3.2e-53 212.6 229 52.8
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 7.2e-53 211.5 226 55.3
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.4e-53 211.1 208 56.7
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.6e-52 210.3 235 54.0
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 3.6e-52 209.1 224 55.4
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 4.7e-52 208.8 243 53.1
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.7e-52 208.8 217 56.2
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 6.1e-52 208.4 236 50.4
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 7.9e-52 208.0 169 63.9
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.8e-51 206.8 216 53.7
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 5.1e-51 205.3 205 56.6
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 8.8e-51 204.5 240 51.2
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.5e-50 203.8 229 52.0
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 1.3e-49 200.7 235 52.3
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 1.7e-49 200.3 242 48.8
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 3.7e-49 199.1 236 51.7
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 3.7e-49 199.1 224 50.4
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 6.3e-49 198.4 235 51.9
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 6.3e-49 198.4 235 51.9
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.8e-48 196.8 236 51.3
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 1.8e-48 196.8 218 53.7
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 1.8e-48 196.8 192 54.7
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 9.1e-48 194.5 205 53.7
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 3.5e-47 192.6 246 48.4
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 4.5e-47 192.2 211 55.5
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 5.0e-46 188.7 198 53.0
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 6.5e-46 188.3 276 43.5
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.9e-45 186.8 188 58.5
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 2.5e-45 186.4 235 47.7
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.2e-45 185.7 195 58.5
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 8.8e-43 177.9 178 58.4
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 2.6e-42 176.4 256 41.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 4.4e-42 175.6 185 57.3
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.3e-41 174.1 185 55.7
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.3e-41 174.1 244 43.4
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 1.1e-40 171.0 185 55.1
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 1.1e-40 171.0 185 55.1
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 1.4e-40 170.6 180 52.2
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 1.3e-38 164.1 197 51.3
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 8.3e-33 144.8 137 55.5
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 3.1e-32 142.9 210 45.2
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 3.1e-32 142.9 207 44.0
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.2e-29 132.5 211 48.3
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 7.2e-29 131.7 135 54.8
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.6e-26 123.2 226 35.0
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.8e-24 117.1 205 42.9
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 8.9e-19 98.2 156 43.6
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 3.7e-17 92.8 80 68.8
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 4.1e-16 89.4 95 56.8
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.1e-08 62.8 178 31.5
Os01g0963800 Oryza sativa ssp. japonica HOM05D037132 ORTHO05D037045 1.2e-07 61.2 118 35.6
HPP92_019356 Vanilla planifolia HOM05D006151 ORTHO05D007487 4.6e-07 59.3 129 39.5
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.3e-06 57.0 209 26.8


User provided reference genes

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