Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G072200 Gossypium raimondii HOM05D008282 ORTHO05D009173 8.6e-39 162.9 69 100.0
Gorai.005G072300 Gossypium raimondii HOM05D008282 ORTHO05D009173 8.6e-39 162.9 69 100.0
Gohir.D02G064050 Gossypium hirsutum HOM05D008282 ORTHO05D009173 3.3e-38 161.0 69 98.6
Gohir.D02G064025 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.6e-37 158.7 68 95.6
Gohir.A02G058202 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.1e-36 156.0 69 95.7
Gohir.A02G058203 Gossypium hirsutum HOM05D008282 ORTHO05D009173 2.3e-36 154.8 69 92.8
Gorai.005G072100 Gossypium raimondii HOM05D008282 ORTHO05D009173 2.6e-35 151.4 68 92.6
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.2e-32 142.5 69 84.1
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.6e-32 142.1 69 84.1
Gorai.005G072000 Gossypium raimondii HOM05D008282 ORTHO05D009173 2.6e-27 124.8 69 79.7
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 1.9e-22 108.6 58 67.2
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 9.6e-22 106.3 63 65.1
COL.COLO4_29927 Corchorus olitorius HOM05D008282 ORTHO05D009173 5.2e-20 100.5 55 67.3
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 2.6e-19 98.2 57 63.2
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 7.6e-19 96.7 57 61.4
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 9.9e-19 96.3 56 66.1
Gohir.A02G058204 Gossypium hirsutum HOM05D008282 ORTHO05D009173 9.9e-19 96.3 68 63.2
Prupe.6G209700 Prunus persica HOM05D008282 ORTHO05D009173 4.9e-18 94.0 56 67.9
Prupe.6G209800 Prunus persica HOM05D008282 ORTHO05D009173 4.9e-18 94.0 56 67.9
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 8.4e-18 93.2 69 56.5
Prupe.6G205300 Prunus persica HOM05D008282 ORTHO05D009173 8.4e-18 93.2 56 67.9
Prupe.6G206000 Prunus persica HOM05D008282 ORTHO05D009173 8.4e-18 93.2 55 67.3
FvH4_1g19000 Fragaria vesca HOM05D008282 ORTHO05D009173 1.1e-17 92.8 63 55.6
Prupe.6G206400 Prunus persica HOM05D008282 ORTHO05D009173 1.4e-17 92.4 56 66.1
Carub.0007s2804 Capsella rubella HOM05D008282 ORTHO05D009173 9.3e-17 89.7 70 55.7
Carub.0007s2805 Capsella rubella HOM05D008282 ORTHO05D009173 4.6e-16 87.4 70 51.4
CARHR220430 Cardamine hirsuta HOM05D008282 ORTHO05D009173 4.6e-16 87.4 56 58.9
THA.LOC104816929 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 1.3e-15 85.9 71 52.1
FAN19G2952 Fragaria x ananassa HOM05D008282 ORTHO05D009173 1.7e-15 85.5 52 57.7
THA.LOC104804768 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 2.3e-15 85.1 59 52.5
MELO3C029307.2 Cucumis melo HOM05D008282 ORTHO05D009173 3.0e-15 84.7 60 53.3
Nitab4.5_0002770g0030 Nicotiana tabacum HOM05D008282 ORTHO05D009173 3.0e-15 84.7 50 62.0
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 3.9e-15 84.3 56 57.1
Thhalv10026987m.g Eutrema salsugineum HOM05D008282 ORTHO05D009173 6.6e-15 83.6 60 56.7
CsaV3_1G039450 Cucumis sativus L. HOM05D008282 ORTHO05D009173 8.7e-15 83.2 54 68.5
AT5G52605 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 1.9e-14 82.0 56 57.1
Thecc.05G205200 Theobroma cacao HOM05D008282 ORTHO05D000004 4.3e-14 80.9 59 54.2
Aa31LG9G3100 Aethionema arabicum HOM05D008282 ORTHO05D009173 9.6e-14 79.7 63 52.4
Solyc07g008377.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 9.6e-14 79.7 58 53.4
Solyc07g008375.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 1.3e-13 79.3 58 53.4
Potri.013G113550 Populus trichocarpa HOM05D008282 ORTHO05D009173 2.1e-13 78.6 60 58.3
Sopen07g004270 Solanum pennellii HOM05D008282 ORTHO05D009173 4.8e-13 77.4 61 50.8
Potri.016G130300 Populus trichocarpa HOM05D008282 ORTHO05D009173 6.2e-13 77.0 60 56.7
Potri.013G113600 Populus trichocarpa HOM05D008282 ORTHO05D009173 8.1e-13 76.6 60 56.7
Carub.0007s2806 Capsella rubella HOM05D008282 ORTHO05D009173 1.1e-12 76.3 54 57.4
Oeu020583.1 Olea europaea HOM05D008282 ORTHO05D009173 1.1e-12 76.3 54 59.3
AT4G14276 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 1.4e-12 75.9 71 47.9
CsaV3_1G039470 Cucumis sativus L. HOM05D008282 ORTHO05D009173 1.8e-12 75.5 54 61.1
Solyc07g008373.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 5.3e-12 73.9 61 49.2
ClCG03G016530 Citrullus lanatus HOM05D008282 ORTHO05D009173 4.5e-11 70.9 46 60.9
Potri.005G074350 Populus trichocarpa HOM05D008282 ORTHO05D009173 4.5e-11 70.9 60 53.3
CARHR216630 Cardamine hirsuta HOM05D008282 ORTHO05D009173 1.3e-10 69.3 44 61.4
MD15G1119700 Malus domestica HOM05D008282 ORTHO05D009173 1.9e-09 65.5 56 53.6
FvH4_4g06730 Fragaria vesca HOM05D008282 ORTHO05D009173 1.6e-08 62.4 62 50.0
Gohir.A02G058201 Gossypium hirsutum HOM05D008282 ORTHO05D009173 7.9e-08 60.1 35 80.0
Atru.chr11.1626 Acer truncatum HOM05D008282 ORTHO05D009173 6.7e-07 57.0 45 46.7
BcaC03g13221 Brassica carinata HOM05D008408 ORTHO05D009173 6.7e-07 57.0 61 41.0
C02p03520 Brassica napus HOM05D008408 ORTHO05D009173 6.7e-07 57.0 61 41.0
BolC2t06311H Brassica oleracea HOM05D008408 ORTHO05D009173 6.7e-07 57.0 61 41.0
THA.LOC109116863 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 1.1e-06 56.2 58 46.6
AT5G08315 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 1.5e-06 55.8 58 46.6
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 1.9e-06 55.5 61 41.0
C02p03510 Brassica napus HOM05D008408 ORTHO05D009173 4.3e-06 54.3 61 39.3
BolC2t06310H Brassica oleracea HOM05D008408 ORTHO05D009173 4.3e-06 54.3 61 39.3


User provided reference genes

Program Settings