Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 2.6e-239 831.6 413 100.0
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 5.9e-236 820.5 413 99.0
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.3e-230 802.7 413 96.4
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.2e-209 733.0 416 87.7
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.6e-209 732.6 425 86.6
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 2.6e-207 725.3 416 87.0
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 3.5e-180 635.2 414 77.1
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 8.2e-177 624.0 404 78.0
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 1.7e-134 483.4 415 61.4
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 3.2e-133 479.2 394 62.7
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 1.8e-131 473.4 395 62.8
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 1.8e-131 473.4 404 60.1
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 2.3e-131 473.0 408 59.8
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 1.5e-130 470.3 396 62.6
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 9.8e-130 467.6 397 60.5
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 1.7e-129 466.8 399 60.4
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 1.1e-128 464.2 401 59.9
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 2.4e-128 463.0 411 57.9
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 9.2e-128 461.1 393 61.3
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 9.2e-128 461.1 397 61.0
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 4.5e-127 458.8 395 61.0
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 5.9e-127 458.4 401 60.6
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 5.9e-127 458.4 411 57.7
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 1.3e-126 457.2 406 57.9
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 1.7e-126 456.8 401 59.6
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 6.6e-126 454.9 400 59.0
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 8.6e-126 454.5 407 61.7
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 8.6e-126 454.5 393 59.3
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 4.3e-125 452.2 394 59.9
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 1.6e-124 450.3 417 56.4
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 2.1e-124 449.9 395 59.7
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 2.8e-124 449.5 403 57.6
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 3.6e-124 449.1 392 56.9
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 3.6e-124 449.1 402 58.2
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 6.1e-124 448.4 396 57.6
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 4.0e-123 445.7 399 59.1
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 5.2e-123 445.3 394 58.1
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 6.8e-123 444.9 397 58.9
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 8.9e-123 444.5 403 58.6
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 2.0e-122 443.4 427 56.4
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 2.2e-121 439.9 393 59.0
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 2.9e-121 439.5 392 57.1
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 3.7e-121 439.1 401 57.1
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 6.4e-121 438.3 403 57.3
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 8.3e-121 438.0 403 55.8
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 1.4e-120 437.2 446 53.6
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 2.4e-120 436.4 396 57.3
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.4e-120 436.4 401 57.1
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 2.4e-120 436.4 402 58.0
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 3.2e-120 436.0 406 56.9
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 5.4e-120 435.3 407 57.2
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 1.2e-119 434.1 396 57.8
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 1.6e-119 433.7 416 55.0
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.5e-119 432.6 401 56.6
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.0e-118 429.5 401 55.9
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.0e-118 429.5 401 55.9
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 3.9e-118 429.1 399 55.4
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 8.6e-118 427.9 394 57.9
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 8.6e-118 427.9 405 55.1
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 8.6e-118 427.9 413 54.0
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 1.5e-117 427.2 412 55.1
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 4.3e-117 425.6 406 55.2
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 5.6e-117 425.2 412 55.3
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 7.3e-117 424.9 397 57.4
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 2.8e-116 422.9 404 56.4
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 1.4e-115 420.6 400 55.8
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 1.8e-115 420.2 403 54.6
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 1.5e-114 417.2 397 56.9
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 4.4e-114 415.6 403 55.8
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 8.3e-113 411.4 411 51.6
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 2.4e-112 409.8 405 53.8
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 5.4e-112 408.7 393 56.5
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 9.2e-112 407.9 414 51.7
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 1.6e-111 407.1 453 50.6
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 4.6e-111 405.6 393 56.0
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 7.8e-111 404.8 402 55.7
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 3.3e-109 399.4 411 52.3
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 4.3e-109 399.1 399 55.4
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 5.6e-109 398.7 409 52.3
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 1.6e-108 397.1 389 53.7
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 2.1e-108 396.7 403 53.1
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 2.8e-108 396.4 403 54.6
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 6.2e-108 395.2 416 51.2
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 1.1e-107 394.4 411 52.3
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 1.8e-107 393.7 411 52.1
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 5.2e-107 392.1 417 54.2
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 8.9e-107 391.3 398 52.8
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 5.8e-106 388.7 411 51.3
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 1.7e-105 387.1 388 54.9
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 6.4e-105 385.2 402 53.2
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 1.9e-104 383.6 376 54.0
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 2.4e-104 383.3 392 53.3
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 2.5e-101 373.2 407 48.9
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 7.3e-101 371.7 405 53.6
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 9.5e-101 371.3 426 49.3
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 4.7e-100 369.0 405 53.6
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 4.7e-100 369.0 404 49.3
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 6.2e-100 368.6 409 53.1
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 6.8e-99 365.2 405 53.1
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 1.2e-98 364.4 406 53.2
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 1.5e-98 364.0 407 48.6
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 1.7e-97 360.5 395 49.1
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 6.6e-94 348.6 321 56.1
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 5.6e-93 345.5 462 44.6
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 4.0e-91 339.3 458 43.4
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 6.4e-89 332.0 300 57.0
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 3.5e-87 326.2 294 54.4
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.3e-84 317.8 266 61.3
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 6.9e-83 312.0 372 47.3
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 7.1e-80 302.0 391 45.3
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 8.7e-78 295.0 402 40.8
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 4.3e-77 292.7 419 41.3
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 4.6e-71 272.7 247 57.9
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 4.6e-71 272.7 380 44.7
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 3.0e-70 270.0 416 41.6
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 8.7e-70 268.5 405 43.0
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 9.6e-69 265.0 440 37.5
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 4.8e-68 262.7 411 40.9
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 6.2e-68 262.3 454 36.6
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 1.0e-62 245.0 402 36.8
HanXRQChr13g0388311 Helianthus annuus HOM05D004986 ORTHO05D005898 1.0e-57 228.4 224 53.1
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 9.7e-53 211.8 176 56.2
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 3.1e-51 206.8 261 40.6
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 4.1e-51 206.5 313 44.1
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 1.4e-43 181.4 187 48.7
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 2.1e-39 167.5 170 50.0
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 6.1e-39 166.0 155 52.9
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 3.9e-38 163.3 177 45.2
SGA_v2.0_scaffold578G53029 Striga asiatica HOM05D004986 ORTHO05D005898 8.8e-38 162.2 200 51.0
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 7.7e-34 149.1 110 62.7
Atru.chr3.32 Acer truncatum HOM05D004986 ORTHO05D005898 1.6e-31 141.4 177 48.6
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 3.6e-31 140.2 323 32.8
MD02G1113100 Malus domestica HOM05D004986 ORTHO05D005898 3.3e-29 133.7 183 45.9
TPR.G33051 Trifolium pratense HOM05D004986 ORTHO05D005898 1.6e-23 114.8 85 64.7
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 4.8e-20 103.2 154 37.0
CARHR281800 Cardamine hirsuta HOM05D004986 ORTHO05D005898 5.5e-16 89.7 53 79.2
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 3.6e-15 87.0 114 44.7
Zm00001eb338840 Zea mays HOM05D004986 ORTHO05D005898 4.7e-15 86.7 60 65.0
arahy.Tifrunner.gnm1.ann1.06FJIN Arachis hypogaea HOM05D004986 ORTHO05D005898 8.0e-15 85.9 59 67.8
arahy.Tifrunner.gnm1.ann1.757MF4 Arachis hypogaea HOM05D004986 ORTHO05D005898 8.0e-15 85.9 59 67.8
Zm00001eb355160 Zea mays HOM05D004986 ORTHO05D005898 1.0e-14 85.5 141 34.8
arahy.Tifrunner.gnm1.ann1.864E1P Arachis hypogaea HOM05D004986 ORTHO05D005898 1.3e-12 78.6 101 46.5
arahy.Tifrunner.gnm1.ann1.GJAM3K Arachis hypogaea HOM05D004986 ORTHO05D005898 1.3e-12 78.6 101 46.5
MCO09G766 Micromonas commoda HOM05D004986 ORTHO05D005898 3.1e-11 73.9 359 22.0
MD02G1112300 Malus domestica HOM05D004986 ORTHO05D005898 2.0e-10 71.2 84 44.0
CDE04G2304 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 4.3e-08 63.5 163 35.6


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