Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 8.8e-60 233.4 117 100.0
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.8e-42 174.5 98 89.8
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.4e-41 172.2 97 89.7
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.1e-41 170.2 97 88.7
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.2e-40 169.9 97 88.7
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.0e-40 169.1 97 87.6
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.0e-39 166.8 97 86.6
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 5.5e-38 161.0 97 84.5
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.5e-38 160.2 109 75.2
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 1.8e-36 156.0 97 82.5
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 2.3e-36 155.6 109 74.3
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 8.9e-36 153.7 97 80.4
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 8.9e-36 153.7 97 80.4
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 8.9e-36 153.7 97 80.4
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 1.2e-35 153.3 97 80.4
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 2.6e-35 152.1 90 84.4
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 3.4e-35 151.8 97 80.4
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 3.4e-35 151.8 97 81.4
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 9.8e-35 150.2 97 80.4
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 2.8e-34 148.7 97 78.4
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 97 78.4
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 66.4
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 66.4
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 66.4
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 66.4
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 66.4
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 66.4
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 65.5
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 2.8e-34 148.7 113 66.4
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 3.7e-34 148.3 98 78.6
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 3.7e-34 148.3 97 78.4
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 3.7e-34 148.3 97 77.3
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 4.9e-34 147.9 97 78.4
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 4.9e-34 147.9 97 78.4
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 4.9e-34 147.9 97 79.4
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 8.3e-34 147.1 97 77.3
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 8.3e-34 147.1 97 77.3
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 8.3e-34 147.1 97 77.3
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 8.3e-34 147.1 97 77.3
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 8.3e-34 147.1 97 77.3
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 8.3e-34 147.1 97 77.3
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 8.3e-34 147.1 97 77.3
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 1.8e-33 146.0 97 80.4
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 4.1e-33 144.8 97 75.3
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 4.1e-33 144.8 97 77.3
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 5.4e-33 144.4 97 76.3
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 9.2e-33 143.7 97 76.3
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-32 142.9 109 66.1
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 4.5e-32 141.4 97 75.3
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 2.3e-31 139.0 105 68.6
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 5.0e-31 137.9 97 74.2
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 6.6e-31 137.5 97 74.2
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 6.6e-31 137.5 97 74.2
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.6e-31 137.1 75 90.7
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-31 137.1 99 69.7
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-30 135.2 99 72.7
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 4.3e-30 134.8 97 73.2
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.2e-29 133.3 83 78.3
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 6.1e-29 131.0 90 75.6
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 2.3e-28 129.0 101 67.3
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.3e-28 129.0 95 72.6
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 9.8e-27 123.6 113 60.2
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 6.4e-26 120.9 73 83.6
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 6.0e-24 114.4 74 78.4
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 2.8e-21 105.5 79 65.8
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 8.0e-21 104.0 77 68.8
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 4.0e-20 101.7 67 76.1
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 4.0e-20 101.7 65 78.5
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 9.8e-19 97.1 98 55.1
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 1.7e-18 96.3 62 77.4
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 3.2e-17 92.0 86 58.1
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.2e-16 90.1 51 86.3
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.1e-15 84.7 51 84.3
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 5.6e-14 81.3 52 73.1
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 1.2e-13 80.1 57 70.2
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 3.6e-13 78.6 75 54.7
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 4.0e-12 75.1 50 78.0
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 5.2e-12 74.7 98 45.9
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.2e-11 73.6 97 48.5
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 2.0e-11 72.8 53 73.6
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.6e-11 72.4 38 89.5
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-10 69.7 76 53.9
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.9e-10 68.9 41 82.9
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 1.4e-09 66.6 51 66.7
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 9.2e-09 63.9 38 78.9
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 9.2e-09 63.9 38 78.9
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 6.0e-08 61.2 38 76.3
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 2.3e-07 59.3 40 75.0
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 3.0e-07 58.9 54 53.7
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 3.0e-07 58.9 54 53.7
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 3.0e-07 58.9 54 53.7
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 1.9e-06 56.2 33 81.8
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 2.5e-06 55.8 38 71.1
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 7.3e-06 54.3 38 73.7
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 9.5e-06 53.9 53 54.7


User provided reference genes

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