Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 9.2e-43 176.4 84 100.0
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 9.2e-43 176.4 84 100.0
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.1e-39 163.7 79 96.2
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 4.6e-34 147.5 70 100.0
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.8e-29 130.6 76 82.9
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 4.6e-26 120.9 66 86.4
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 4.6e-26 120.9 66 86.4
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.0e-26 120.6 70 80.0
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 6.0e-26 120.6 71 80.3
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.3e-25 119.4 67 85.1
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 6.6e-25 117.1 66 83.3
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 8.6e-25 116.7 66 83.3
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 1.1e-24 116.3 68 80.9
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-24 115.5 73 75.3
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 1.2e-23 112.8 69 76.8
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 8.1e-23 110.2 69 75.4
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 8.1e-23 110.2 74 73.0
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 1.1e-22 109.8 68 76.5
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 3.1e-22 108.2 67 77.6
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.1e-22 108.2 66 77.3
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 4.0e-22 107.8 69 72.5
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 7.5e-21 103.6 61 80.3
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 9.9e-21 103.2 64 76.6
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 1.3e-20 102.8 64 75.0
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.2e-19 98.2 51 92.2
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 4.1e-19 97.8 58 79.3
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 1.2e-18 96.3 68 70.6
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.2e-18 96.3 65 72.3
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 6.0e-18 94.0 67 74.6
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 1.0e-17 93.2 62 71.0
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 3.0e-17 91.7 66 68.2
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 8.6e-17 90.1 61 73.8
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 1.1e-16 89.7 59 71.2
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 1.5e-16 89.4 57 73.7
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 5.6e-16 87.4 64 70.3
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 1.2e-15 86.3 66 66.7
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 1.8e-14 82.4 53 67.9
Potri.008G047850 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.8e-14 82.4 62 67.7
Migut.N02115 Erythranthe guttata HOM05D007671 ORTHO05D009777 3.1e-14 81.6 48 85.4
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 4.0e-14 81.3 48 81.2
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 5.2e-14 80.9 55 72.7
Manes.06G038352 Manihot esculenta HOM05D007671 ORTHO05D009777 1.5e-13 79.3 72 62.5
Prupe.1G135800 Prunus persica HOM05D007671 ORTHO05D009777 2.0e-13 79.0 52 73.1
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 2.0e-13 79.0 59 64.4
Prupe.2G064500 Prunus persica HOM05D007671 ORTHO05D009777 9.9e-13 76.6 68 58.8
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 2.2e-12 75.5 58 62.1
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 6.4e-12 73.9 59 61.0
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 6.4e-12 73.9 43 72.1
SHI08305 Sapria himalayana HOM05D007671 ORTHO05D009777 4.1e-11 71.2 68 61.8
Gohir.D02G056966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.4e-11 70.9 37 91.9
Thhalv10006404m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 9.2e-11 70.1 67 56.7
Os02g0193933 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.6e-10 69.3 51 60.8
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 2.1e-10 68.9 38 89.5
Gohir.A08G235950 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.1e-10 68.9 37 91.9
Gohir.D08G256350 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.1e-10 68.9 37 91.9
Os08g0114150 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.7e-10 68.6 46 73.9
Os07g0595750 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 7.8e-10 67.0 42 69.0
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.3e-09 65.5 40 67.5
Os02g0808601 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 5.1e-09 64.3 47 57.4
Os07g0661450 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 5.1e-09 64.3 40 67.5
FAN24G3042 Fragaria x ananassa HOM05D007671 ORTHO05D009777 6.6e-09 63.9 36 88.9
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.5e-08 62.8 39 66.7
Os02g0811501 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.9e-08 62.4 42 64.3
Aqoxy6G01862 Aquilegia oxysepala HOM05D007671 ORTHO05D009777 2.5e-08 62.0 36 86.1
FAN20G2582 Fragaria x ananassa HOM05D007671 ORTHO05D035424 7.3e-08 60.5 43 65.1
Os02g0159850 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 7.3e-08 60.5 46 58.7
Pp3c23_15500 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.2e-07 59.7 42 78.6
Os02g0158701 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.6e-07 59.3 40 62.5
Os07g0685600 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.6e-07 59.3 39 64.1
Pp3c12_8280 Physcomitrium patens HOM05D007671 ORTHO05D009777 4.7e-07 57.8 59 62.7
Pp3c12_8281 Physcomitrium patens HOM05D007671 ORTHO05D009777 4.7e-07 57.8 59 62.7
Pp3c12_8290 Physcomitrium patens HOM05D007671 ORTHO05D009777 4.7e-07 57.8 59 62.7
Mapoly0045s0139 Marchantia polymorpha HOM05D007671 ORTHO05D009777 8.1e-07 57.0 77 49.4
Mapoly0047s0081 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.1e-06 56.6 68 52.9
Prupe.1G136100 Prunus persica HOM05D007671 ORTHO05D009777 1.1e-06 56.6 37 78.4
Mapoly0130s0018 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.4e-06 56.2 36 80.6
Mapoly3284s0001 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.4e-06 56.2 44 70.5
Mapoly0012s0007 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.1e-06 55.1 35 82.9
Mapoly0168s0020 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.1e-06 55.1 35 82.9
Mapoly0010s0188 Marchantia polymorpha HOM05D007671 ORTHO05D009777 4.0e-06 54.7 40 75.0
Mapoly0170s0037 Marchantia polymorpha HOM05D007671 ORTHO05D009777 4.0e-06 54.7 40 75.0
Mapoly0025s0123 Marchantia polymorpha HOM05D007671 ORTHO05D009777 6.9e-06 53.9 55 60.0
Mapoly0124s0032 Marchantia polymorpha HOM05D007671 ORTHO05D009777 9.0e-06 53.5 34 82.4


User provided reference genes

Program Settings