Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G043400 Gossypium raimondii HOM05D021021 ORTHO05D022794 5.2e-210 734.2 380 100.0
Gohir.D02G039200 Gossypium hirsutum HOM05D021021 ORTHO05D022794 7.5e-201 703.7 380 95.8
Gohir.A02G032500 Gossypium hirsutum HOM05D021021 ORTHO05D022794 4.0e-178 628.2 380 85.8
Gorai.005G043300 Gossypium raimondii HOM05D021021 ORTHO05D022794 1.1e-116 424.1 217 97.7
Thecc.04G233100 Theobroma cacao HOM05D021021 ORTHO05D022794 6.2e-54 215.7 361 42.7
Thecc.04G233200 Theobroma cacao HOM05D021021 ORTHO05D022794 2.2e-27 127.5 236 40.3
Gohir.D05G342750 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.4e-18 97.4 152 38.2
Gohir.D05G343433 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.2e-18 96.7 312 28.5
Duzib213G0359 Durio zibethinus HOM05D008014 ORTHO05D009981 7.1e-18 95.9 172 33.7
Thecc.07G105600 Theobroma cacao HOM05D008014 ORTHO05D009981 1.6e-17 94.7 229 27.9
Gorai.009G371800 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.1e-17 94.4 183 33.9
Gorai.009G369600 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.7e-17 94.0 316 27.8
Gorai.009G369100 Gossypium raimondii HOM05D008014 ORTHO05D009981 3.9e-16 90.1 367 27.8
COL.COLO4_30081 Corchorus olitorius HOM05D008014 ORTHO05D009981 5.1e-16 89.7 147 35.4
Duzib187G0568 Durio zibethinus HOM05D008014 ORTHO05D009981 1.9e-15 87.8 113 38.9
Gohir.D13G153000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.5e-15 87.4 194 29.4
Gohir.A04G040100 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.3e-15 87.0 318 28.3
Gorai.002G063000 Gossypium raimondii HOM05D008014 ORTHO05D009981 4.3e-15 86.7 337 25.2
Duzib187G1296 Durio zibethinus HOM05D008014 ORTHO05D009981 5.6e-15 86.3 363 27.0
Gohir.A01G057332 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.6e-15 86.3 130 39.2
Gohir.A04G040200 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.6e-15 86.3 292 25.7
Gorai.013G172900 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.3e-14 85.1 219 28.8
Duzib187G1128 Durio zibethinus HOM05D008014 ORTHO05D009981 1.6e-14 84.7 178 30.9
Duzib187G1720 Durio zibethinus HOM05D008014 ORTHO05D009981 1.6e-14 84.7 178 30.9
Duzib187G1989 Durio zibethinus HOM05D008014 ORTHO05D009981 1.6e-14 84.7 178 30.9
Gohir.A01G057400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.1e-14 84.3 196 31.6
Gohir.D01G043732 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.1e-14 84.3 130 39.2
Gorai.002G062900 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.1e-14 84.3 130 39.2
Gohir.A04G040400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 8.1e-14 82.4 158 32.9
Gohir.D08G180600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 8.1e-14 82.4 149 35.6
Duzib213G1088 Durio zibethinus HOM05D008014 ORTHO05D009981 1.8e-13 81.3 130 36.2
Gohir.D01G043800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.8e-13 81.3 335 25.7
Gorai.009G369400 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.8e-13 81.3 358 26.5
Gohir.D05G342800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.4e-13 80.9 358 26.0
Gorai.009G369900 Gossypium raimondii HOM05D008014 ORTHO05D009981 4.0e-13 80.1 313 27.8
Gohir.A13G148400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 6.9e-13 79.3 171 29.2
Duzib170G0545 Durio zibethinus HOM05D008014 ORTHO05D009981 3.4e-12 77.0 168 32.1
Gohir.A01G057600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.8e-12 76.3 134 33.6
Thecc.07G106000 Theobroma cacao HOM05D008014 ORTHO05D009981 7.6e-12 75.9 369 25.7
Gohir.A05G086400 Gossypium hirsutum HOM05D041197 ORTHO05D036119 1.0e-11 75.5 121 39.7
Gorai.004G189300 Gossypium raimondii HOM05D013541 ORTHO05D009981 1.0e-11 75.5 129 36.4
Gohir.D01G043900 Gossypium hirsutum HOM05D008014 ORTHO05D047837 2.9e-11 73.9 119 37.0
Gorai.002G063100 Gossypium raimondii HOM05D008014 ORTHO05D047837 2.9e-11 73.9 119 37.0
Gohir.D01G044000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.9e-11 73.2 135 31.9
Gorai.002G063200 Gossypium raimondii HOM05D008014 ORTHO05D009981 6.5e-11 72.8 135 31.9
Gorai.004G189100 Gossypium raimondii HOM05D008014 ORTHO05D009981 8.4e-11 72.4 129 35.7
COL.COLO4_30083 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.9e-10 71.2 143 31.5
Gohir.A08G160100 Gossypium hirsutum HOM05D013541 ORTHO05D009981 3.2e-10 70.5 129 34.9
Gohir.A08G160200 Gossypium hirsutum HOM05D013541 ORTHO05D009981 3.2e-10 70.5 129 34.9
Gohir.D08G180500 Gossypium hirsutum HOM05D013541 ORTHO05D009981 5.5e-10 69.7 181 29.8
Thecc.09G297200 Theobroma cacao HOM05D008014 ORTHO05D009981 5.5e-10 69.7 130 34.6
Gohir.A01G057500 Gossypium hirsutum HOM05D008014 ORTHO05D009981 9.3e-10 68.9 119 35.3
Thecc.09G297300 Theobroma cacao HOM05D008014 ORTHO05D009981 2.7e-09 67.4 130 33.1
Duzib168G0242 Durio zibethinus HOM05D008014 ORTHO05D009981 1.3e-08 65.1 252 29.0
Duzib213G0842 Durio zibethinus HOM05D008014 ORTHO05D009981 1.8e-08 64.7 94 38.3
Duzib205G1222 Durio zibethinus HOM05D008014 ORTHO05D009981 2.5e-07 60.8 107 34.6
Gohir.D08G180666 Gossypium hirsutum HOM05D010401 ORTHO05D012682 4.3e-07 60.1 123 29.3
Thecc.09G297600 Theobroma cacao HOM05D008014 ORTHO05D009981 7.4e-07 59.3 130 29.2
COL.COLO4_17130 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.6e-06 58.2 132 32.6
Thecc.09G297500 Theobroma cacao HOM05D008014 ORTHO05D009981 3.7e-06 57.0 130 30.8


User provided reference genes

Program Settings