Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 9.8e-59 229.9 118 100.0
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.9e-58 228.4 118 99.2
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 3.0e-55 218.4 118 95.8
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.2e-42 175.6 110 76.4
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.8e-36 156.0 105 73.3
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 4.6e-32 141.4 104 61.5
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.3e-31 139.8 104 64.4
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 1.3e-31 139.8 105 62.9
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 3.9e-31 138.3 100 65.0
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 5.1e-31 137.9 97 68.0
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.5e-30 135.6 97 70.1
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 4.3e-30 134.8 106 65.1
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 5.6e-30 134.4 122 52.5
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 7.3e-30 134.0 111 58.6
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 7.3e-30 134.0 102 60.8
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 2.1e-29 132.5 92 66.3
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.6e-29 131.7 102 59.8
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 4.7e-29 131.3 108 62.0
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 4.7e-29 131.3 107 65.4
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 6.2e-29 131.0 102 60.8
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 8.1e-29 130.6 118 55.1
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.4e-28 129.8 106 57.5
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 1.4e-28 129.8 111 61.3
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.4e-28 129.8 121 52.9
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 2.4e-28 129.0 86 72.1
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 4.0e-28 128.3 95 60.0
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 6.9e-28 127.5 100 61.0
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 1.5e-27 126.3 100 60.0
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.5e-27 126.3 64 81.2
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 1.5e-27 126.3 67 83.6
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 2.0e-27 125.9 104 57.7
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 2.6e-27 125.6 105 62.9
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 3.4e-27 125.2 92 64.1
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 5.8e-27 124.4 117 54.7
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 5.8e-27 124.4 95 61.1
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 5.8e-27 124.4 109 56.9
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 5.8e-27 124.4 102 57.8
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 5.8e-27 124.4 105 62.9
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 9.9e-27 123.6 98 60.2
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 1.3e-26 123.2 120 55.8
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.7e-26 122.9 104 61.5
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.7e-26 122.9 88 62.5
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 1.7e-26 122.9 118 53.4
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 1.7e-26 122.9 118 53.4
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 2.9e-26 122.1 108 57.4
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 2.9e-26 122.1 77 71.4
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.9e-26 122.1 90 68.9
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.9e-26 121.3 127 48.8
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 4.9e-26 121.3 98 64.3
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 4.9e-26 121.3 100 59.0
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 6.4e-26 120.9 64 84.4
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.4e-26 120.6 90 64.4
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.1e-25 120.2 105 56.2
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.4e-25 119.8 103 59.2
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.9e-25 119.4 90 67.8
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 3.2e-25 118.6 103 58.3
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 5.4e-25 117.9 102 55.9
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 5.4e-25 117.9 102 55.9
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 5.4e-25 117.9 102 57.8
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 5.4e-25 117.9 101 58.4
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 9.3e-25 117.1 94 62.8
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 9.3e-25 117.1 101 58.4
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 9.3e-25 117.1 101 58.4
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.2e-24 116.7 100 59.0
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.2e-24 116.7 84 63.1
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.2e-24 116.7 103 59.2
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 3.5e-24 115.2 103 52.4
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 4.6e-24 114.8 99 58.6
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 4.6e-24 114.8 100 57.0
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 4.6e-24 114.8 100 57.0
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 6.0e-24 114.4 108 52.8
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 7.8e-24 114.0 80 65.0
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 7.8e-24 114.0 113 52.2
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.0e-23 113.6 103 54.4
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.3e-23 113.2 107 52.3
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.3e-23 113.2 108 53.7
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 1.7e-23 112.8 122 54.1
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 1.7e-23 112.8 98 55.1
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.3e-23 112.5 99 55.6
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 2.3e-23 112.5 86 60.5
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 2.3e-23 112.5 61 77.0
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 3.0e-23 112.1 83 63.9
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 5.1e-23 111.3 103 53.4
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 6.6e-23 110.9 59 76.3
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 1.9e-22 109.4 95 55.8
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.9e-22 109.4 132 45.5
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 3.3e-22 108.6 101 51.5
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 4.3e-22 108.2 105 51.4
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 4.3e-22 108.2 61 75.4
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 4.3e-22 108.2 59 74.6
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 5.6e-22 107.8 115 48.7
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 7.3e-22 107.5 91 53.8
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.6e-21 106.3 106 50.9
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 3.6e-21 105.1 106 50.0
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.1e-21 104.0 77 64.9
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.4e-20 103.2 54 79.6
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.5e-19 99.8 107 46.7
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.0e-19 99.4 99 51.5
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 2.0e-19 99.4 81 58.0
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.3e-15 85.9 59 62.7
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 3.0e-15 85.5 85 42.4
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 8.1e-13 77.4 86 45.3
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.8e-12 76.3 57 57.9
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 3.3e-06 55.5 29 72.4


User provided reference genes

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