Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G014700 Gossypium raimondii HOM05D000001 ORTHO05D218850 2.5e-36 154.8 74 100.0
Gohir.A02G010800 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.9e-16 88.2 56 80.4
Gohir.D02G011200 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.9e-16 88.2 56 80.4
Gohir.D02G011400 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.9e-16 88.2 56 80.4
Gorai.005G014400 Gossypium raimondii HOM05D000001 ORTHO05D000003 2.9e-16 88.2 56 80.4
Duzib268G1461 Durio zibethinus HOM05D000001 ORTHO05D000003 2.4e-15 85.1 56 75.0
Gohir.A02G157102 Gossypium hirsutum HOM05D000001 ORTHO05D000003 2.1e-14 82.0 55 76.4
COL.COLO4_08216 Corchorus olitorius HOM05D000001 ORTHO05D000003 1.5e-12 75.9 56 62.5
Thecc.07G074000 Theobroma cacao HOM05D000001 ORTHO05D000003 9.6e-12 73.2 56 66.1
Atru.chr9.56 Acer truncatum HOM05D000001 ORTHO05D000003 1.3e-11 72.8 57 59.6
Psat1g119800 Pisum sativum HOM05D000001 ORTHO05D000003 3.1e-10 68.2 58 55.2
Glyma.16G209700 Glycine max HOM05D000001 ORTHO05D000003 1.5e-09 65.9 56 53.6
Lj2g0019511 Lotus japonicus HOM05D000001 ORTHO05D000003 2.6e-09 65.1 56 53.6
Lalb_Chr22g0354121 Lupinus albus HOM05D000001 ORTHO05D000003 2.6e-09 65.1 56 55.4
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 4.5e-09 64.3 57 52.6
Ciclev10023539m.g Citrus clementina HOM05D000001 ORTHO05D000003 7.6e-09 63.5 57 54.4
Phvul.004G135700 Phaseolus vulgaris HOM05D000001 ORTHO05D000003 1.0e-08 63.2 56 51.8
Potri.018G152300 Populus trichocarpa HOM05D000001 ORTHO05D000003 1.0e-08 63.2 53 56.6
TWI36G1627 Tripterygium wilfordii HOM05D000001 ORTHO05D000003 1.3e-08 62.8 57 52.6
VMungo0464G0796 Vigna mungo HOM05D000001 ORTHO05D000003 2.2e-08 62.0 56 53.6
CSS0020883 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 3.8e-08 61.2 61 49.2
Dinv09761 Davidia involucrata HOM05D000001 ORTHO05D000003 3.8e-08 61.2 57 52.6
Sabra18G0127400 Salix brachista HOM05D000001 ORTHO05D000003 3.8e-08 61.2 53 54.7
Aqoxy3G04349 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 1.1e-07 59.7 56 53.6
Medtr6g066360 Medicago truncatula HOM05D000001 ORTHO05D000003 1.9e-07 58.9 58 48.3
Nn3g18538 Nelumbo nucifera HOM05D000001 ORTHO05D000003 2.5e-07 58.5 56 48.2
Ca_07113_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.2e-07 58.2 50 52.0
Glyma.09G160300 Glycine max HOM05D000001 ORTHO05D021530 5.5e-07 57.4 48 54.2
Lj5P169T45 Lonicera japonica HOM05D000001 ORTHO05D000003 1.2e-06 56.2 57 45.6
arahy.Tifrunner.gnm1.ann1.7K7KSL Arachis hypogaea HOM05D000001 ORTHO05D000003 2.1e-06 55.5 56 42.9
Manes.01G159700 Manihot esculenta HOM05D000001 ORTHO05D000003 2.1e-06 55.5 57 47.4
arahy.Tifrunner.gnm1.ann1.C97LW1 Arachis hypogaea HOM05D000001 ORTHO05D000003 4.6e-06 54.3 56 42.9
arahy.Tifrunner.gnm1.ann1.SKN2CR Arachis hypogaea HOM05D000001 ORTHO05D000003 4.6e-06 54.3 56 42.9
Lsat_1_v5_gn_4_183100 Lactuca sativa HOM05D000001 ORTHO05D000003 7.9e-06 53.5 58 46.6
QL10p016039 Quercus lobata HOM05D000001 ORTHO05D012157 7.9e-06 53.5 56 46.4
SGA_v2.0_scaffold12G06019 Striga asiatica HOM05D000001 ORTHO05D000003 7.9e-06 53.5 68 38.2


User provided reference genes

Program Settings