Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 4.3e-167 591.3 301 100.0
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 1.2e-166 589.7 301 99.7
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 4.0e-165 584.7 301 98.7
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 3.6e-158 561.6 301 94.0
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 7.1e-154 547.4 301 91.4
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.7e-153 545.4 301 91.0
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 3.5e-153 545.0 301 91.4
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 1.3e-152 543.1 301 90.0
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 3.9e-152 541.6 301 90.7
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 5.1e-152 541.2 317 87.1
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 5.2e-149 531.2 300 87.3
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 5.8e-148 527.7 300 88.0
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 9.9e-148 526.9 301 86.7
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 8.4e-147 523.9 300 88.0
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 1.9e-146 522.7 300 86.3
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 2.4e-146 522.3 300 88.0
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 4.2e-146 521.5 301 86.4
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 3.5e-145 518.5 300 85.0
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 1.7e-144 516.2 300 86.3
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 6.6e-144 514.2 300 86.0
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 1.5e-143 513.1 300 83.0
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 1.9e-143 512.7 300 85.3
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 3.3e-143 511.9 300 84.3
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 9.6e-143 510.4 300 85.0
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 1.3e-142 510.0 300 83.3
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 1.6e-142 509.6 300 83.0
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 2.8e-142 508.8 300 83.0
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 2.8e-142 508.8 300 84.7
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 2.8e-142 508.8 299 84.3
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 3.6e-142 508.4 300 84.3
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 4.8e-142 508.1 300 84.0
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 4.8e-142 508.1 300 84.3
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 4.8e-142 508.1 300 83.7
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 6.2e-142 507.7 300 84.0
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 8.1e-142 507.3 300 84.3
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 8.1e-142 507.3 300 84.7
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 1.1e-141 506.9 300 84.3
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 1.4e-141 506.5 300 83.3
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 3.1e-141 505.4 300 83.3
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 3.1e-141 505.4 300 83.7
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 9.0e-141 503.8 300 83.7
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 9.0e-141 503.8 300 83.7
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 1.5e-140 503.1 300 83.7
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 2.0e-140 502.7 300 83.0
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 2.6e-140 502.3 301 81.4
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 3.4e-140 501.9 299 83.3
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 3.4e-140 501.9 300 83.3
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 4.5e-140 501.5 300 82.3
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 9.9e-140 500.4 300 81.3
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 9.9e-140 500.4 300 83.3
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.3e-139 500.0 299 83.3
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 1.7e-139 499.6 300 81.0
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 1.7e-139 499.6 300 83.0
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 2.2e-139 499.2 300 82.7
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 3.8e-139 498.4 303 82.2
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 6.4e-139 497.7 301 80.7
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 8.4e-139 497.3 301 80.7
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 8.4e-139 497.3 301 80.4
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 1.1e-138 496.9 300 82.3
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 1.4e-138 496.5 302 82.8
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.4e-138 496.5 297 83.2
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 1.4e-138 496.5 300 82.3
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 2.4e-138 495.7 302 83.1
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 2.4e-138 495.7 301 80.4
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 3.2e-138 495.4 302 83.1
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 5.4e-138 494.6 302 82.8
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 7.1e-138 494.2 300 82.3
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 1.6e-137 493.0 302 82.5
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 2.1e-137 492.7 302 82.8
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 2.1e-137 492.7 300 81.7
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 2.7e-137 492.3 301 79.7
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 3.5e-137 491.9 303 82.5
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 4.6e-137 491.5 301 80.4
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 6.0e-137 491.1 303 81.8
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 6.0e-137 491.1 303 82.2
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 6.0e-137 491.1 303 82.2
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 7.9e-137 490.7 300 79.3
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 6.7e-136 487.6 300 79.0
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 1.1e-135 486.9 300 81.0
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 1.1e-135 486.9 300 80.3
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 1.5e-135 486.5 304 81.6
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 2.5e-135 485.7 302 80.8
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 3.3e-135 485.3 299 80.6
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 5.6e-135 484.6 301 79.7
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 7.4e-135 484.2 304 79.6
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 7.4e-135 484.2 301 80.7
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 1.3e-134 483.4 300 79.3
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 1.6e-134 483.0 299 79.6
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 2.8e-134 482.3 301 80.1
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 4.8e-134 481.5 300 79.3
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 6.2e-134 481.1 302 80.8
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 8.1e-134 480.7 301 78.7
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 1.4e-133 479.9 300 79.7
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 2.4e-133 479.2 301 79.1
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 1.5e-132 476.5 300 77.3
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 2.6e-132 475.7 302 80.5
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 3.4e-132 475.3 304 78.3
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 3.4e-132 475.3 320 75.0
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 9.9e-132 473.8 302 78.5
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 1.7e-131 473.0 301 77.7
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 3.8e-131 471.9 317 76.3
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 3.8e-131 471.9 299 76.9
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 4.9e-131 471.5 304 78.0
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 6.4e-131 471.1 302 79.5
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 8.4e-131 470.7 299 79.3
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 1.9e-130 469.5 339 72.0
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 3.2e-130 468.8 300 78.7
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 5.5e-130 468.0 300 78.3
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 1.6e-129 466.5 298 76.8
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 2.3e-128 462.6 299 77.6
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 2.3e-128 462.6 306 75.2
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 5.6e-127 458.0 301 76.4
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 9.6e-127 457.2 335 71.3
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 1.1e-122 443.7 247 88.7
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 1.9e-122 443.0 249 85.9
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 1.9e-119 433.0 260 81.5
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 3.1e-117 425.6 299 68.2
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 3.1e-117 425.6 300 74.7
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 4.5e-116 421.8 340 64.7
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 1.3e-115 420.2 292 69.5
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 5.0e-115 418.3 309 70.9
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 4.2e-114 415.2 300 71.0
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 9.3e-114 414.1 300 71.7
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 1.4e-112 410.2 292 68.8
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.3e-112 409.5 301 73.4
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 1.3e-110 403.7 287 69.0
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 7.9e-105 384.4 299 64.5
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 7.4e-103 377.9 297 65.0
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 3.7e-102 375.6 508 45.1
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 1.3e-99 367.1 209 85.6
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 6.5e-99 364.8 291 60.8
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 4.2e-98 362.1 209 85.2
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 2.2e-94 349.7 219 81.3
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 5.0e-91 338.6 199 83.9
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 3.6e-81 305.8 243 68.3
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 1.6e-76 290.4 298 51.3
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 2.7e-76 289.7 246 58.9
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 3.5e-76 289.3 242 64.9
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 9.2e-69 264.6 154 86.4
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 2.2e-54 216.9 281 43.1
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 2.3e-51 206.8 298 40.3
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 3.6e-49 199.5 108 89.8
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 3.2e-45 186.4 148 60.1
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 1.9e-42 177.2 101 86.1
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 2.7e-36 156.8 196 49.5
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.3e-35 153.7 84 85.7
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 3.6e-33 146.4 84 84.5
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 2.6e-23 113.6 82 70.7
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 3.4e-23 113.2 70 78.6
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 4.9e-22 109.4 270 28.5
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 4.9e-22 109.4 87 70.1
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 6.4e-22 109.0 151 41.7
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 3.2e-21 106.7 162 40.7
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 4.2e-21 106.3 63 77.8
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 1.8e-19 100.9 86 65.1
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 1.1e-18 98.2 121 48.8
BcaB04g19294 Brassica carinata HOM05D004556 ORTHO05D005298 1.3e-09 68.2 53 69.8
Sp1g08890 Schrenkiella parvula HOM05D000111 ORTHO05D013786 1.8e-08 64.3 63 58.7
RcHm_v2.0_Chr7g0229041 Rosa chinensis HOM05D004556 ORTHO05D005298 2.4e-08 63.9 40 75.0
Lj9A668T37 Lonicera japonica HOM05D004556 ORTHO05D005298 4.5e-07 59.7 67 50.7


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