Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.0e-26 121.7 62 100.0
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.1e-19 97.8 51 94.1
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.5e-15 84.3 48 81.2
Gorai.001G174500 Gossypium raimondii HOM05D006909 ORTHO05D008682 1.1e-13 79.3 63 69.8
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.6e-12 74.3 44 77.3
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 4.7e-12 73.9 46 73.9
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 6.2e-12 73.6 48 77.1
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 6.8e-11 70.1 47 74.5
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 6.8e-11 70.1 47 74.5
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 1.5e-10 68.9 49 73.5
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.9e-09 64.7 41 75.6
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 8.3e-09 63.2 36 86.1
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.9e-08 62.0 36 83.3
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.9e-08 62.0 36 83.3
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.9e-08 62.0 36 83.3
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.4e-08 61.6 41 73.2
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.4e-08 61.6 36 83.3
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.2e-08 61.2 36 83.3
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 3.2e-08 61.2 36 80.6
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 7.1e-08 60.1 36 80.6
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 7.1e-08 60.1 36 80.6
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 7.1e-08 60.1 36 80.6
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 7.1e-08 60.1 36 80.6
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 7.1e-08 60.1 33 87.9
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 9.2e-08 59.7 36 80.6
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.6e-07 58.9 36 77.8
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 2.1e-07 58.5 34 82.4
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 2.1e-07 58.5 36 77.8
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 3.5e-07 57.8 36 75.0
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 4.6e-07 57.4 36 75.0
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 6.0e-07 57.0 36 75.0
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 6.0e-07 57.0 36 75.0
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 6.0e-07 57.0 34 79.4
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 6.0e-07 57.0 36 75.0
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 7.8e-07 56.6 35 77.1
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 7.8e-07 56.6 36 75.0
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 7.8e-07 56.6 36 75.0
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 7.8e-07 56.6 36 75.0
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 7.8e-07 56.6 35 77.1
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.0e-06 56.2 36 75.0
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 1.0e-06 56.2 36 77.8
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.0e-06 56.2 36 72.2
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 1.0e-06 56.2 36 72.2
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 1.0e-06 56.2 36 72.2
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 1.3e-06 55.8 35 74.3
Sabra01G0100900 Salix brachista HOM05D006475 ORTHO05D007969 1.3e-06 55.8 40 67.5
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 1.3e-06 55.8 36 72.2
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 1.7e-06 55.5 36 75.0
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 1.7e-06 55.5 36 75.0
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 1.7e-06 55.5 36 75.0
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 1.7e-06 55.5 34 79.4
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 1.7e-06 55.5 34 79.4
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.3e-06 55.1 36 69.4
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 2.3e-06 55.1 36 69.4
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 2.3e-06 55.1 34 76.5
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 3.0e-06 54.7 36 69.4
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 3.9e-06 54.3 36 72.2
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 3.9e-06 54.3 34 70.6
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 5.1e-06 53.9 35 74.3
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 5.1e-06 53.9 35 74.3
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 5.1e-06 53.9 35 74.3
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 5.1e-06 53.9 36 72.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.1e-06 53.9 36 72.2
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 5.1e-06 53.9 36 75.0
Gorai.002G041300 Gossypium raimondii HOM05D001071 ORTHO05D000932 5.1e-06 53.9 30 86.7
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 5.1e-06 53.9 36 72.2
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 6.6e-06 53.5 35 71.4
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 6.6e-06 53.5 36 72.2
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 6.6e-06 53.5 35 71.4
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 6.6e-06 53.5 35 68.6


User provided reference genes

Program Settings