Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G095600 Gossypium raimondii HOM05D004264 ORTHO05D004680 5.8e-62 240.7 123 100.0
Gohir.D12G051300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.9e-45 185.3 106 92.5
Gohir.D01G029100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.9e-44 182.6 102 94.1
Gohir.D04G142200 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.1e-43 179.1 106 89.6
Gorai.004G074900 Gossypium raimondii HOM05D004264 ORTHO05D004680 2.5e-41 172.2 114 80.7
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.4e-36 156.4 86 94.2
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.6e-35 152.9 123 73.2
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 2.7e-35 152.1 121 71.9
Gohir.D11G227700 Gossypium hirsutum HOM05D004264 ORTHO05D004680 4.6e-35 151.4 110 73.6
Gohir.D10G240300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.3e-34 149.8 110 73.6
Gorai.011G276000 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.8e-34 149.4 110 73.6
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 1.3e-32 143.3 119 68.1
Gorai.011G076200 Gossypium raimondii HOM05D004264 ORTHO05D004680 6.9e-31 137.5 70 95.7
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 1.5e-30 136.3 107 71.0
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 7.1e-28 127.5 119 62.2
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 8.7e-26 120.6 116 58.6
Ciclev10013172m.g Citrus clementina HOM05D004264 ORTHO05D004680 8.8e-18 94.0 107 50.5
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 3.3e-17 92.0 113 46.0
Haze_21059 Corylus avellana HOM05D004264 ORTHO05D004680 3.3e-17 92.0 99 49.5
QL07p034201 Quercus lobata HOM05D004264 ORTHO05D004680 4.3e-17 91.7 86 52.3
GSVIVG01030301001 Vitis vinifera HOM05D004264 ORTHO05D004680 7.4e-17 90.9 85 54.1
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 1.3e-16 90.1 120 44.2
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 2.8e-16 89.0 86 53.5
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 1.1e-15 87.0 117 45.3
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 1.4e-15 86.7 90 54.4
Eucgr.G00894 Eucalyptus grandis HOM05D004264 ORTHO05D004680 5.3e-15 84.7 107 45.8
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 5.3e-15 84.7 90 53.3
Prupe.6G283000 Prunus persica HOM05D004264 ORTHO05D004680 9.1e-15 84.0 90 52.2
Cpa.g.sc120.22 Carica papaya HOM05D004264 ORTHO05D004680 2.6e-14 82.4 122 45.1
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 2.6e-14 82.4 117 43.6
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 2.6e-14 82.4 117 45.3
FAN14G2539 Fragaria x ananassa HOM05D004264 ORTHO05D004680 3.4e-14 82.0 90 48.9
FvH4_6g10920 Fragaria vesca HOM05D004264 ORTHO05D004680 7.7e-14 80.9 90 48.9
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.0e-13 80.5 90 47.8
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 1.0e-13 80.5 107 45.8
RcHm_v2.0_Chr3g0462181 Rosa chinensis HOM05D004264 ORTHO05D004680 1.3e-13 80.1 90 47.8
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 2.2e-13 79.3 86 46.5
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 2.9e-13 79.0 107 43.0
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 5.0e-13 78.2 117 43.6
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 6.5e-13 77.8 105 43.8
vmacro20314 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 6.5e-13 77.8 107 43.9
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 1.4e-12 76.6 104 43.3
vmacro05245 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 1.4e-12 76.6 107 43.9
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.9e-12 76.3 90 46.7
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.9e-12 76.3 90 46.7
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.9e-12 76.3 90 46.7
Rhsim05G0223600 Rhododendron simsii HOM05D004264 ORTHO05D004680 2.5e-12 75.9 107 43.0
vmacro05226 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 2.5e-12 75.9 107 43.9
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 4.2e-12 75.1 117 41.9
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 5.5e-12 74.7 107 42.1
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 9.4e-12 73.9 105 42.9
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 1.6e-11 73.2 86 48.8
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 2.1e-11 72.8 86 44.2
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 4.7e-11 71.6 118 40.7
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 4.7e-11 71.6 107 42.1
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 6.1e-11 71.2 107 40.2
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 6.1e-11 71.2 137 39.4
HanXRQChr02g0036811 Helianthus annuus HOM05D004264 ORTHO05D004680 6.1e-11 71.2 85 49.4
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 6.1e-11 71.2 117 39.3
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 1.0e-10 70.5 107 40.2
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 1.0e-10 70.5 117 35.9
TAR209G0008 Trochodendron aralioides HOM05D004264 ORTHO05D004680 1.4e-10 70.1 111 41.4
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 1.8e-10 69.7 104 41.3
MELO3C026013.2 Cucumis melo HOM05D004264 ORTHO05D004680 3.9e-10 68.6 86 41.9
HanXRQChr13g0390241 Helianthus annuus HOM05D004264 ORTHO05D004680 6.7e-10 67.8 100 41.0
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 8.8e-10 67.4 127 38.6
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 2.0e-09 66.2 117 33.3
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 2.0e-09 66.2 126 36.5
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 2.0e-09 66.2 117 35.0
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 2.0e-09 66.2 104 40.4
Sopen04g028370 Solanum pennellii HOM05D004264 ORTHO05D004680 3.3e-09 65.5 107 34.6
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 4.4e-09 65.1 117 35.9
Cpa.g.sc82.40 Carica papaya HOM05D004264 ORTHO05D004680 1.3e-08 63.5 99 41.4
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 1.7e-08 63.2 82 40.2
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 1.7e-08 63.2 108 34.3
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 1.7e-08 63.2 116 34.5
BolC1t05486H Brassica oleracea HOM05D004264 ORTHO05D004680 3.7e-08 62.0 107 34.6
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 4.8e-08 61.6 117 33.3
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 4.8e-08 61.6 82 40.2
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 4.8e-08 61.6 82 40.2
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 4.8e-08 61.6 58 53.4
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 4.8e-08 61.6 119 32.8
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 8.2e-08 60.8 127 31.5
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 1.8e-07 59.7 75 41.3
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 1.8e-07 59.7 117 34.2
Sc09g0006620 Simmondsia chinensis HOM05D004264 ORTHO05D004680 2.4e-07 59.3 121 33.9
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 3.1e-07 58.9 105 35.2
DCAR_018676 Daucus carota HOM05D004264 ORTHO05D004680 4.1e-07 58.5 110 31.8
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 5.3e-07 58.2 120 32.5
MSTRG.5553 Avicennia marina HOM05D004264 ORTHO05D004680 5.3e-07 58.2 99 35.4
Aa31LG1G23180 Aethionema arabicum HOM05D004264 ORTHO05D004680 1.2e-06 57.0 103 35.0
Aqoxy3G03065 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 1.2e-06 57.0 105 37.1
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 1.2e-06 57.0 88 35.2
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 1.5e-06 56.6 116 32.8
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 1.5e-06 56.6 119 35.3
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 3.4e-06 55.5 116 31.0
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 4.5e-06 55.1 107 31.8
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 4.5e-06 55.1 78 35.9


User provided reference genes

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