Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.1e-41 172.9 92 100.0
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 7.2e-41 170.2 92 98.9
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 1.3e-37 159.5 90 92.2
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.3e-37 159.5 89 96.6
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 2.8e-37 158.3 90 93.3
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 6.3e-37 157.1 88 96.6
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 6.3e-37 157.1 88 96.6
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 6.3e-37 157.1 88 96.6
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 6.3e-37 157.1 88 96.6
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.4e-36 156.0 88 95.5
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 1.4e-36 156.0 88 93.2
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 1.4e-36 156.0 88 93.2
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 1.8e-36 155.6 88 95.5
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 2.4e-36 155.2 88 93.2
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 2.4e-36 155.2 89 92.1
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 3.1e-36 154.8 88 94.3
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 3.1e-36 154.8 88 93.2
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 3.1e-36 154.8 88 94.3
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 4.1e-36 154.5 88 94.3
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 5.3e-36 154.1 88 92.0
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 5.3e-36 154.1 88 93.2
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 5.3e-36 154.1 88 94.3
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 7.0e-36 153.7 88 93.2
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 7.0e-36 153.7 88 94.3
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 7.0e-36 153.7 88 90.9
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 7.0e-36 153.7 88 93.2
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 7.0e-36 153.7 89 89.9
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 7.0e-36 153.7 88 92.0
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 7.0e-36 153.7 88 92.0
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 9.1e-36 153.3 88 90.9
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 9.1e-36 153.3 88 93.2
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 9.1e-36 153.3 88 93.2
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 9.1e-36 153.3 88 93.2
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 1.2e-35 152.9 88 90.9
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 1.2e-35 152.9 88 90.9
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 1.2e-35 152.9 88 92.0
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 1.2e-35 152.9 88 92.0
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 1.6e-35 152.5 88 88.6
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 1.6e-35 152.5 88 88.6
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 1.6e-35 152.5 88 93.2
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 1.6e-35 152.5 88 93.2
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.0e-35 152.1 88 92.0
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 2.0e-35 152.1 88 92.0
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 2.0e-35 152.1 88 92.0
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 2.6e-35 151.8 87 93.1
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 2.6e-35 151.8 88 89.8
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 3.5e-35 151.4 88 90.9
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 3.5e-35 151.4 88 90.9
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 3.5e-35 151.4 88 89.8
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 4.5e-35 151.0 88 92.0
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 4.5e-35 151.0 88 92.0
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 4.5e-35 151.0 88 89.8
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 4.5e-35 151.0 88 90.9
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 5.9e-35 150.6 88 89.8
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 5.9e-35 150.6 88 89.8
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 5.9e-35 150.6 88 89.8
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 5.9e-35 150.6 87 90.8
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 5.9e-35 150.6 88 89.8
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 5.9e-35 150.6 88 89.8
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 5.9e-35 150.6 88 90.9
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 7.7e-35 150.2 88 89.8
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 7.7e-35 150.2 88 89.8
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 7.7e-35 150.2 88 89.8
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 1.0e-34 149.8 88 90.9
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 1.0e-34 149.8 88 90.9
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 1.0e-34 149.8 88 90.9
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 1.0e-34 149.8 88 89.8
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 1.7e-34 149.1 88 88.6
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 1.7e-34 149.1 88 88.6
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 1.7e-34 149.1 88 88.6
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 2.2e-34 148.7 87 89.7
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 2.2e-34 148.7 88 88.6
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 2.2e-34 148.7 88 88.6
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 2.2e-34 148.7 87 89.7
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 2.9e-34 148.3 87 88.5
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 2.9e-34 148.3 88 88.6
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 2.9e-34 148.3 87 88.5
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 2.9e-34 148.3 87 88.5
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 2.9e-34 148.3 87 88.5
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 2.9e-34 148.3 87 88.5
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 2.9e-34 148.3 87 88.5
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 2.9e-34 148.3 88 88.6
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 2.9e-34 148.3 88 88.6
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 2.9e-34 148.3 87 89.7
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 3.8e-34 147.9 87 89.7
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 3.8e-34 147.9 88 89.8
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 3.8e-34 147.9 88 88.6
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 3.8e-34 147.9 88 87.5
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 5.0e-34 147.5 88 87.5
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 5.0e-34 147.5 88 87.5
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 5.0e-34 147.5 88 86.4
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 5.0e-34 147.5 88 87.5
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 5.0e-34 147.5 88 87.5
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 6.5e-34 147.1 88 87.5
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 6.5e-34 147.1 88 87.5
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 6.5e-34 147.1 88 87.5
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 6.5e-34 147.1 88 87.5
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 6.5e-34 147.1 87 87.4
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 8.5e-34 146.7 88 87.5
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 8.5e-34 146.7 87 87.4
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 8.5e-34 146.7 87 87.4
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 8.5e-34 146.7 87 88.5
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 8.5e-34 146.7 87 88.5
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 8.5e-34 146.7 87 87.4
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 8.5e-34 146.7 88 87.5
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 8.5e-34 146.7 88 88.6
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 8.5e-34 146.7 88 88.6
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 1.1e-33 146.4 87 88.5
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 1.1e-33 146.4 87 88.5
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 1.1e-33 146.4 87 88.5
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 1.5e-33 146.0 88 86.4
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 1.5e-33 146.0 88 87.5
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 1.9e-33 145.6 88 87.5
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 2.5e-33 145.2 88 86.4
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 2.5e-33 145.2 88 86.4
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 2.5e-33 145.2 87 86.2
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 2.5e-33 145.2 88 88.6
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 4.2e-33 144.4 88 86.4
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 4.2e-33 144.4 87 85.1
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 7.2e-33 143.7 87 85.1
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 9.4e-33 143.3 88 86.4
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 2.1e-32 142.1 88 85.2
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.7e-32 141.7 88 84.1
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 4.7e-32 141.0 88 83.0
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 4.7e-32 141.0 83 86.7
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 8.0e-32 140.2 88 85.2
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 1.8e-31 139.0 88 83.0
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 2.6e-30 135.2 87 85.1
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 2.2e-29 132.1 88 79.5
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 3.7e-29 131.3 88 79.5
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.1e-28 129.8 84 82.1
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 1.8e-28 129.0 90 74.4
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 1.3e-26 122.9 72 87.5
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 2.2e-26 122.1 88 73.9
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 2.2e-26 122.1 89 74.2
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 1.9e-25 119.0 88 77.3
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 1.8e-23 112.5 88 72.7
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-21 106.3 88 69.3
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 2.3e-15 85.5 58 74.1
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 5.9e-11 70.9 44 93.2
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 2.5e-09 65.5 42 76.2


User provided reference genes

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