Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D08G079900 Gossypium hirsutum HOM05D009515 ORTHO05D010550 2.4e-72 275.4 137 100.0
Gorai.004G084900 Gossypium raimondii HOM05D009515 ORTHO05D010550 2.4e-72 275.4 137 100.0
Gohir.A08G071700 Gossypium hirsutum HOM05D009515 ORTHO05D010550 6.4e-70 267.3 137 97.1
Duzib133G0496 Durio zibethinus HOM05D009515 ORTHO05D010550 1.8e-35 152.9 148 64.9
Duzib211G0224 Durio zibethinus HOM05D009515 ORTHO05D010550 2.6e-34 149.1 149 64.4
Duzib138G0019 Durio zibethinus HOM05D009515 ORTHO05D010550 5.5e-29 131.3 148 59.5
Thecc.01G289300 Theobroma cacao HOM05D009515 ORTHO05D010550 1.6e-20 103.2 145 51.0
Gohir.A08G116000 Gossypium hirsutum HOM05D009515 ORTHO05D010550 4.5e-15 85.1 151 48.3
Gohir.D08G136800 Gossypium hirsutum HOM05D009515 ORTHO05D010550 5.0e-14 81.6 152 46.7
Gorai.004G140100 Gossypium raimondii HOM05D009515 ORTHO05D010550 2.7e-12 75.9 148 45.3
Sabra14G0101700 Salix brachista HOM05D009515 ORTHO05D010550 1.4e-11 73.6 147 40.1
Gorai.008G007800 Gossypium raimondii HOM05D009515 ORTHO05D010550 2.3e-11 72.8 150 42.7
Manes.05G069200 Manihot esculenta HOM05D009515 ORTHO05D010550 1.5e-10 70.1 139 40.3
Potri.014G135560 Populus trichocarpa HOM05D009515 ORTHO05D010550 1.3e-09 67.0 143 39.9
Cpa.g.sc9.153 Carica papaya HOM05D009515 ORTHO05D010550 4.8e-09 65.1 148 39.9
Manes.01G212700 Manihot esculenta HOM05D009515 ORTHO05D010550 6.3e-09 64.7 134 38.1
Nn3g21250 Nelumbo nucifera HOM05D009515 ORTHO05D010550 1.8e-08 63.2 138 34.8
Atru.chr5.1291 Acer truncatum HOM05D009515 ORTHO05D010550 5.4e-08 61.6 166 34.3
Ciclev10022737m.g Citrus clementina HOM05D009515 ORTHO05D010550 5.4e-08 61.6 153 38.6
Eucgr.K03430 Eucalyptus grandis HOM05D012100 ORTHO05D010550 7.0e-08 61.2 133 36.1
Hma1.2p1_0209F.1_g089180 Hydrangea macrophylla HOM05D009515 ORTHO05D010550 7.0e-08 61.2 145 40.0
AL5G45770 Arabidopsis lyrata HOM05D010932 ORTHO05D011540 1.2e-07 60.5 140 32.9
Lalb_Chr18g0047521 Lupinus albus HOM05D010368 ORTHO05D012190 1.6e-07 60.1 143 32.9
FAN20G0201 Fragaria x ananassa HOM05D012100 ORTHO05D010550 3.5e-07 58.9 136 39.0
Dinv38337 Davidia involucrata HOM05D013457 ORTHO05D011528 1.0e-06 57.4 141 35.5
Glyma.02G151900 Glycine max HOM05D010368 ORTHO05D012190 1.0e-06 57.4 136 37.5
VMungo0720G0366 Vigna mungo HOM05D010368 ORTHO05D012190 1.0e-06 57.4 139 37.4
RcHm_v2.0_Chr6g0292431 Rosa chinensis HOM05D012100 ORTHO05D010550 1.3e-06 57.0 143 39.2
TAR633G2431 Trochodendron aralioides HOM05D012100 ORTHO05D010550 1.3e-06 57.0 144 37.5
Sed0000526 Sechium edule HOM05D022235 ORTHO05D010550 1.7e-06 56.6 135 34.8
THA.LOC104803071 Tarenaya hassleriana HOM05D010932 ORTHO05D011540 1.7e-06 56.6 135 37.0
Gohir.A12G008300 Gossypium hirsutum HOM05D009515 ORTHO05D010550 2.3e-06 56.2 102 45.1
Gohir.D12G008000 Gossypium hirsutum HOM05D009515 ORTHO05D010550 2.3e-06 56.2 116 42.2
TAR365G0883 Trochodendron aralioides HOM05D012100 ORTHO05D010550 5.0e-06 55.1 134 37.3
CARHR143340 Cardamine hirsuta HOM05D010932 ORTHO05D011540 6.6e-06 54.7 141 32.6
ClCG09G006580 Citrullus lanatus HOM05D022235 ORTHO05D010550 6.6e-06 54.7 134 31.3
CiPaw.08G100900 Carya illinoinensis HOM05D012100 ORTHO05D010550 8.6e-06 54.3 156 37.2


User provided reference genes

Program Settings