Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.4e-74 282.7 128 100.0
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.3e-61 238.8 113 96.5
Gohir.D08G029100 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.3e-45 186.4 110 80.0
Gorai.004G026200 Gossypium raimondii HOM05D009688 ORTHO05D005549 3.0e-45 185.3 110 79.1
Gohir.A08G018500 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.9e-44 182.6 110 79.1
Gorai.004G026400 Gossypium raimondii HOM05D009688 ORTHO05D005549 3.4e-41 171.8 117 69.2
Gohir.D08G029150 Gossypium hirsutum HOM05D009688 ORTHO05D005549 9.4e-39 163.7 117 67.5
Gohir.A08G018300 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.1e-30 136.0 121 55.4
Gohir.A08G018400 Gossypium hirsutum HOM05D009688 ORTHO05D005549 5.1e-29 131.3 121 52.9
Gohir.D08G029000 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.2e-27 125.9 121 51.2
Gorai.004G026100 Gossypium raimondii HOM05D009688 ORTHO05D005549 2.2e-27 125.9 121 51.2
Gohir.D08G028900 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.2e-22 110.2 121 48.8
Gorai.004G026000 Gossypium raimondii HOM05D009688 ORTHO05D005549 6.1e-22 107.8 127 46.5
Gohir.A08G018508 Gossypium hirsutum HOM05D009688 ORTHO05D005549 6.7e-21 104.4 84 58.3
Gohir.D08G029175 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.8e-19 99.0 109 45.9
Gorai.004G026500 Gossypium raimondii HOM05D009688 ORTHO05D005549 7.0e-18 94.4 89 50.6
Thecc.09G180000 Theobroma cacao HOM05D009688 ORTHO05D005549 1.1e-15 87.0 113 44.2
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.8e-13 79.7 121 33.1
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 2.3e-13 79.3 120 34.2
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 2.3e-13 79.3 122 36.9
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.2e-13 78.2 121 34.7
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 8.8e-13 77.4 119 33.6
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 2.0e-12 76.3 124 31.5
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.6e-12 75.9 121 32.2
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 2.6e-12 75.9 125 34.4
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 5.7e-12 74.7 100 40.0
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 5.7e-12 74.7 100 39.0
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 5.7e-12 74.7 128 34.4
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 7.5e-12 74.3 100 42.0
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 7.5e-12 74.3 100 42.0
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 7.5e-12 74.3 122 33.6
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 7.5e-12 74.3 122 33.6
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.5e-12 74.3 121 33.1
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 9.8e-12 73.9 128 33.6
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 9.8e-12 73.9 130 33.1
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-11 73.6 127 32.3
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-11 73.6 127 32.3
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 1.7e-11 73.2 102 38.2
Prupe.1G079900 Prunus persica HOM05D009688 ORTHO05D005549 1.7e-11 73.2 108 34.3
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 2.2e-11 72.8 105 36.2
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 4.8e-11 71.6 103 37.9
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 4.8e-11 71.6 108 37.0
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.8e-11 71.6 119 37.8
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 6.3e-11 71.2 102 39.2
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 8.3e-11 70.9 129 31.8
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 8.3e-11 70.9 113 38.9
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-10 70.5 91 42.9
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 1.1e-10 70.5 119 33.6
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.4e-10 69.3 100 37.0
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 2.4e-10 69.3 127 32.3
CsaV3_2G008640 Cucumis sativus L. HOM05D006945 ORTHO05D005549 2.4e-10 69.3 135 31.1
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 3.1e-10 68.9 108 38.0
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 4.1e-10 68.6 98 37.8
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 4.1e-10 68.6 128 33.6
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 4.1e-10 68.6 108 38.0
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 5.4e-10 68.2 100 36.0
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 5.4e-10 68.2 129 33.3
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.4e-10 68.2 121 32.2
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 7.0e-10 67.8 115 34.8
Sabra18G0112900 Salix brachista HOM05D009688 ORTHO05D005549 9.1e-10 67.4 115 37.4
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-09 67.0 91 40.7
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 2.0e-09 66.2 128 33.6
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.0e-09 66.2 111 36.0
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 3.5e-09 65.5 104 33.7
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 4.5e-09 65.1 127 32.3
MELO3C003988.2 Cucumis melo HOM05D006945 ORTHO05D005549 7.7e-09 64.3 89 33.7
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.3e-08 63.5 119 28.6
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 1.7e-08 63.2 84 38.1
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 2.2e-08 62.8 94 34.0
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 2.9e-08 62.4 119 30.3
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 2.9e-08 62.4 119 30.3
Potri.018G133200 Populus trichocarpa HOM05D009688 ORTHO05D005549 3.8e-08 62.0 107 37.4
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.0e-08 61.6 86 38.4
Medtr2g037525 Medicago truncatula HOM05D009822 ORTHO05D011160 5.0e-08 61.6 115 33.9
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 8.5e-08 60.8 119 29.4
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 1.1e-07 60.5 100 32.0
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 1.5e-07 60.1 93 33.3
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.9e-07 59.7 86 37.2
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.9e-07 59.7 95 36.8
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 3.2e-07 58.9 119 28.6
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 5.5e-07 58.2 94 33.0
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 5.5e-07 58.2 94 33.0
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 5.5e-07 58.2 94 33.0
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.2e-07 57.8 101 33.7
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 9.4e-07 57.4 125 30.4
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.7e-06 55.8 80 37.5
Psat0s3712g0120 Pisum sativum HOM05D009822 ORTHO05D011160 2.7e-06 55.8 127 28.3
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.6e-06 55.5 87 36.8
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.6e-06 55.5 87 36.8
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 8.0e-06 54.3 89 32.6


User provided reference genes

Program Settings