Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 2.3e-193 678.7 341 100.0
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 2.2e-183 645.6 341 96.8
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 2.0e-181 639.0 341 95.6
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 3.8e-156 555.1 341 82.1
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 4.7e-154 548.1 341 81.2
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 5.7e-152 541.2 333 82.9
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 4.6e-133 478.4 328 72.0
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 7.8e-133 477.6 334 71.0
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 2.0e-128 463.0 337 70.0
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 3.7e-127 458.8 335 68.7
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 6.0e-125 451.4 341 69.5
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.3e-124 450.3 335 68.1
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 5.2e-121 438.3 335 66.0
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 2.0e-120 436.4 328 67.4
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 5.8e-120 434.9 340 66.8
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.9e-119 432.6 334 65.6
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.4e-118 430.3 327 67.0
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.4e-118 430.3 335 65.1
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 4.2e-118 428.7 336 63.4
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 4.2e-118 428.7 323 64.1
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 4.2e-118 428.7 334 64.4
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 5.4e-118 428.3 335 64.5
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 7.1e-118 427.9 334 64.4
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 9.3e-118 427.6 333 64.6
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 1.6e-117 426.8 338 66.0
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 3.5e-117 425.6 335 63.9
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 4.6e-117 425.2 330 62.4
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 4.6e-117 425.2 335 63.9
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 6.0e-117 424.9 326 64.7
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 3.9e-116 422.2 342 64.3
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 5.1e-116 421.8 335 62.4
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 8.7e-116 421.0 307 69.7
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 9.6e-115 417.5 334 62.3
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 6.2e-114 414.8 329 61.1
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 1.4e-113 413.7 337 62.3
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 1.4e-113 413.7 336 62.5
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 6.9e-113 411.4 329 61.4
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 2.0e-112 409.8 329 61.1
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 2.6e-112 409.5 336 59.5
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 7.6e-112 407.9 334 62.6
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 9.9e-112 407.5 330 64.5
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 2.9e-111 406.0 370 58.1
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 6.4e-111 404.8 329 63.2
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 6.4e-111 404.8 324 62.0
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 6.4e-111 404.8 331 63.1
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 1.1e-110 404.1 345 60.6
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.4e-110 403.7 335 60.9
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.4e-110 403.7 360 60.8
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 2.4e-110 402.9 336 62.2
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 2.4e-110 402.9 329 62.3
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 5.4e-110 401.7 329 62.0
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 5.4e-110 401.7 329 63.5
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 1.2e-109 400.6 329 61.7
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 1.6e-109 400.2 328 63.1
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 2.7e-109 399.4 329 61.1
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 4.6e-109 398.7 329 61.7
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 1.0e-108 397.5 336 60.1
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 1.0e-108 397.5 330 62.4
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 3.0e-108 396.0 329 61.4
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 6.6e-108 394.8 324 59.3
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 8.7e-108 394.4 338 58.3
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 3.3e-107 392.5 337 59.9
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 4.3e-107 392.1 340 56.8
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 7.4e-107 391.3 330 61.2
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 9.6e-107 391.0 298 66.4
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 1.3e-106 390.6 329 60.5
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 8.1e-106 387.9 336 60.4
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 4.0e-105 385.6 330 61.8
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 9.0e-105 384.4 329 59.3
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.5e-104 383.6 334 60.8
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 2.0e-104 383.3 329 59.9
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 2.6e-104 382.9 329 60.2
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 2.6e-104 382.9 342 57.0
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 9.9e-104 380.9 329 58.4
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 1.7e-103 380.2 343 56.9
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 1.6e-101 373.6 329 57.1
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 3.5e-101 372.5 326 59.5
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 6.0e-101 371.7 358 56.1
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 5.1e-100 368.6 300 63.3
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 3.3e-99 365.9 336 58.6
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 5.6e-99 365.2 333 58.0
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 9.6e-99 364.4 324 58.6
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 3.7e-98 362.5 336 58.3
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 6.2e-98 361.7 292 62.3
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 2.4e-97 359.8 341 56.3
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 6.9e-97 358.2 329 57.1
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 6.9e-97 358.2 329 57.1
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 6.9e-97 358.2 377 52.3
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 6.9e-97 358.2 335 56.1
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 1.5e-96 357.1 328 57.9
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 2.0e-96 356.7 327 57.5
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 2.2e-95 353.2 277 62.1
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 2.9e-95 352.8 322 57.8
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 2.9e-95 352.8 322 57.8
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 6.5e-95 351.7 243 68.7
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 8.4e-95 351.3 325 57.5
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 3.5e-93 345.9 325 55.7
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 7.4e-91 338.2 336 53.9
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 1.3e-90 337.4 336 53.6
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 2.8e-90 336.3 333 54.4
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 6.3e-90 335.1 330 55.2
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 2.0e-88 330.1 337 52.8
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 1.3e-87 327.4 336 51.5
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 5.0e-87 325.5 333 52.6
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 1.9e-86 323.6 329 53.5
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 4.2e-86 322.4 328 53.7
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 7.2e-86 321.6 321 53.3
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 9.3e-86 321.2 326 55.2
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 1.2e-85 320.9 338 50.0
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 1.0e-84 317.8 326 52.8
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.0e-84 317.8 323 53.9
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 1.4e-81 307.4 326 51.2
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 2.4e-81 306.6 341 49.9
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 3.1e-81 306.2 325 51.4
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 3.1e-81 306.2 332 50.0
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 9.0e-81 304.7 331 51.1
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 2.6e-80 303.1 331 52.6
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.7e-79 300.4 341 49.9
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 1.7e-79 300.4 326 51.5
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 4.6e-77 292.4 486 39.1
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 6.1e-77 292.0 324 49.1
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 9.7e-75 284.6 322 47.8
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 5.3e-73 278.9 236 65.3
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 8.5e-71 271.6 324 47.8
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 9.4e-70 268.1 199 64.8
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.5e-67 260.8 339 46.0
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 3.7e-66 256.1 290 49.7
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 1.2e-64 251.1 331 45.0
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 4.0e-60 236.1 308 46.1
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 1.2e-59 234.6 212 55.2
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.9e-54 217.2 329 36.2
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 7.2e-54 215.3 322 39.4
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 6.1e-53 212.2 142 69.7
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 7.0e-49 198.7 319 36.4
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 8.5e-47 191.8 193 51.3
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 1.2e-45 188.0 312 35.3
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 1.2e-45 188.0 141 61.7
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 2.1e-45 187.2 260 47.7
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 9.5e-38 161.8 330 35.5
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.2e-35 154.8 231 42.9
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.3e-34 151.4 124 62.9
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 5.6e-30 136.0 126 54.0
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 1.4e-25 121.3 125 57.6
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.6e-24 117.9 182 44.0
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 4.6e-24 116.3 168 39.9
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 9.5e-22 108.6 116 51.7
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 9.5e-22 108.6 90 60.0
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.7e-21 106.3 101 59.4
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 1.7e-18 97.8 113 54.0
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-18 97.4 196 33.7
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.4e-17 94.7 115 49.6
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 5.1e-15 86.3 247 30.8
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 1.6e-13 81.3 216 28.7
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 2.4e-09 67.4 51 52.9
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 6.6e-07 59.3 319 23.8
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 5.6e-06 56.2 48 52.1
Cre03.g177900 Chlamydomonas reinhardtii HOM05D004681 ORTHO05D005541 9.6e-06 55.5 324 23.1


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