Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 2.4e-38 161.8 85 100.0
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 7.6e-29 130.2 68 98.5
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 3.8e-28 127.9 68 97.1
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 9.3e-19 96.7 69 76.8
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 3.5e-18 94.7 68 77.9
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 7.9e-18 93.6 68 76.5
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 5.1e-17 90.9 50 90.0
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 3.3e-16 88.2 64 73.4
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 1.8e-14 82.4 66 66.7
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 9.0e-14 80.1 68 69.1
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 1.2e-13 79.7 64 67.2
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 3.4e-13 78.2 68 66.2
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 4.5e-13 77.8 82 59.8
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 4.5e-13 77.8 50 76.0
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 5.9e-13 77.4 65 66.2
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 1.0e-12 76.6 52 75.0
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 1.3e-12 76.3 42 88.1
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 1.7e-12 75.9 65 64.6
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 2.2e-12 75.5 64 64.1
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 2.9e-12 75.1 67 61.2
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 3.8e-12 74.7 63 65.1
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 3.8e-12 74.7 64 62.5
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 3.8e-12 74.7 64 64.1
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 5.0e-12 74.3 57 66.7
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 6.5e-12 73.9 41 87.8
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 6.5e-12 73.9 68 64.7
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 6.5e-12 73.9 56 69.6
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 8.5e-12 73.6 65 63.1
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 8.5e-12 73.6 42 85.7
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 1.1e-11 73.2 57 68.4
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 1.4e-11 72.8 41 85.4
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 1.4e-11 72.8 38 89.5
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 1.4e-11 72.8 48 77.1
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 1.4e-11 72.8 57 70.2
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 1.9e-11 72.4 44 81.8
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 1.9e-11 72.4 57 68.4
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 1.9e-11 72.4 57 68.4
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 1.9e-11 72.4 70 57.1
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 1.9e-11 72.4 58 67.2
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 2.5e-11 72.0 44 81.8
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 2.5e-11 72.0 54 66.7
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 2.5e-11 72.0 54 70.4
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 2.5e-11 72.0 64 64.1
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 2.5e-11 72.0 64 64.1
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 3.2e-11 71.6 43 81.4
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 4.2e-11 71.2 42 83.3
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 5.5e-11 70.9 63 63.5
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 5.5e-11 70.9 63 63.5
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 5.5e-11 70.9 63 63.5
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 9.4e-11 70.1 49 77.6
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 9.4e-11 70.1 49 77.6
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 9.4e-11 70.1 66 60.6
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 9.4e-11 70.1 56 67.9
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 1.2e-10 69.7 59 64.4
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 1.2e-10 69.7 55 69.1
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 1.2e-10 69.7 43 79.1
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 1.2e-10 69.7 41 82.9
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 1.6e-10 69.3 62 64.5
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 1.6e-10 69.3 48 77.1
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 1.6e-10 69.3 43 79.1
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 2.1e-10 68.9 57 66.7
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 2.1e-10 68.9 36 94.4
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 2.1e-10 68.9 37 89.2
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 2.7e-10 68.6 63 55.6
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 2.7e-10 68.6 36 94.4
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 2.7e-10 68.6 56 64.3
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 2.7e-10 68.6 38 89.5
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 3.6e-10 68.2 48 72.9
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 4.6e-10 67.8 41 80.5
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 4.6e-10 67.8 64 59.4
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 6.1e-10 67.4 49 75.5
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 6.1e-10 67.4 39 84.6
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 7.9e-10 67.0 42 76.2
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 7.9e-10 67.0 56 67.9
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 7.9e-10 67.0 56 67.9
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 7.9e-10 67.0 56 67.9
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 1.0e-09 66.6 48 72.9
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.0e-09 66.6 56 67.9
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 1.4e-09 66.2 67 55.2
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 1.8e-09 65.9 53 66.0
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.8e-09 65.9 37 81.1
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 1.8e-09 65.9 37 86.5
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 1.8e-09 65.9 38 86.8
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 2.3e-09 65.5 38 78.9
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 3.0e-09 65.1 63 58.7
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 5.1e-09 64.3 38 81.6
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 1.1e-08 63.2 53 64.2
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 1.1e-08 63.2 38 76.3
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 1.9e-08 62.4 45 73.3
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 1.9e-08 62.4 45 73.3
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 2.5e-08 62.0 51 56.9
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 4.3e-08 61.2 50 62.0
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 5.7e-08 60.8 55 63.6
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 5.7e-08 60.8 55 63.6


User provided reference genes

Program Settings