Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 8.4e-182 640.2 317 100.0
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.9e-178 629.0 317 98.7
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 3.8e-174 614.8 318 96.9
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 3.5e-135 485.3 323 76.5
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 3.5e-135 485.3 300 82.3
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 5.4e-128 461.5 316 75.3
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.6e-127 459.9 319 72.1
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 2.7e-127 459.1 317 73.2
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 6.6e-126 454.5 341 68.3
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.5e-125 452.6 317 71.3
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.6e-125 451.4 317 71.3
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.8e-124 449.1 324 70.7
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 1.8e-123 446.4 324 70.1
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 3.1e-123 445.7 318 72.3
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 4.0e-123 445.3 326 69.3
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.0e-123 445.3 329 69.6
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.9e-123 444.1 317 70.3
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 7.5e-122 441.0 321 71.0
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 9.8e-122 440.7 321 70.7
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 1.3e-121 440.3 327 69.1
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-121 439.1 317 70.0
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 2.9e-121 439.1 319 70.2
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 3.7e-121 438.7 321 70.4
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 1.1e-120 437.2 333 67.3
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 1.4e-120 436.8 324 68.8
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 3.2e-120 435.6 315 71.1
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.2e-120 435.6 312 70.8
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 4.1e-120 435.3 331 67.4
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 7.0e-120 434.5 332 66.9
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 9.2e-120 434.1 333 67.0
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 2.7e-119 432.6 321 70.1
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 3.9e-118 428.7 325 67.7
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 5.0e-118 428.3 302 71.9
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 3.3e-117 425.6 326 67.8
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.2e-116 423.7 307 69.7
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 6.2e-116 421.4 325 65.5
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 8.1e-116 421.0 326 67.5
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 1.4e-115 420.2 337 66.2
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 6.8e-115 417.9 325 66.5
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.0e-114 416.4 328 65.9
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 5.8e-114 414.8 317 67.2
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.3e-113 413.7 320 67.2
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 3.7e-113 412.1 316 68.0
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-112 410.2 315 67.3
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 2.4e-112 409.5 314 66.2
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 4.1e-112 408.7 326 64.7
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 9.2e-112 407.5 295 70.5
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 9.2e-112 407.5 295 70.5
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 4.6e-111 405.2 322 64.3
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 6.0e-111 404.8 324 66.0
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 2.3e-110 402.9 312 66.3
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 3.0e-110 402.5 326 64.4
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 5.1e-110 401.7 326 62.0
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.5e-109 400.2 370 58.4
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.9e-109 399.8 293 70.3
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 5.6e-109 398.3 287 71.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.6e-108 396.7 293 69.6
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.1e-108 394.4 315 64.1
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.4e-107 393.7 334 62.9
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 1.2e-103 380.6 325 62.8
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 2.1e-103 379.8 330 60.3
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 4.6e-103 378.6 335 59.7
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 7.3e-101 371.3 317 62.1
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 6.2e-100 368.2 328 61.3
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.4e-99 367.1 321 61.1
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.8e-99 366.7 323 59.8
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 2.4e-99 366.3 271 68.6
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 2.4e-99 366.3 270 69.6
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 5.8e-98 361.7 292 65.4
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-97 359.4 315 60.6
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.0e-94 350.9 364 53.8
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.0e-94 350.9 333 55.9
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 2.5e-93 346.3 277 64.3
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 2.1e-92 343.2 288 61.5
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 2.4e-88 329.7 320 54.7
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 4.6e-87 325.5 321 55.1
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 9.9e-82 307.8 221 67.0
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 8.4e-81 304.7 301 54.8
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-80 304.3 273 60.8
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 3.2e-80 302.8 327 54.1
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 4.2e-80 302.4 207 70.0
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 7.1e-80 301.6 213 69.5
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.9e-79 298.1 309 54.4
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.5e-77 293.1 317 55.2
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 3.3e-77 292.7 319 51.1
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-75 287.0 317 53.0
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.8e-75 287.0 320 52.8
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.5e-73 278.5 221 67.4
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 2.1e-71 273.5 214 66.4
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.0e-71 271.9 317 51.1
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 4.3e-69 265.8 273 53.8
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.2e-68 261.5 187 67.4
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 5.3e-67 258.8 366 42.3
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.5e-61 240.0 176 68.2
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.7e-61 238.0 179 66.5
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 2.7e-55 219.9 174 66.7
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 3.9e-54 216.1 144 73.6
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.3e-52 211.1 279 41.2
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 1.3e-49 201.1 161 63.4
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 1.7e-49 200.7 172 58.7
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.1e-45 188.0 221 45.7
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 8.2e-44 181.8 290 40.7
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.5e-32 144.4 147 53.7
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 1.8e-30 137.5 238 38.7
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 9.8e-21 105.1 69 73.9
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 2.8e-20 103.6 100 58.0
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 5.9e-18 95.9 96 53.1
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.0e-17 95.1 91 62.6
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 2.1e-15 87.4 325 25.2
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 5.9e-10 69.3 41 78.0
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.2e-07 61.6 87 46.0
BcaC05g25535 Brassica carinata HOM05D007396 ORTHO05D009228 2.1e-07 60.8 102 39.2


User provided reference genes

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