Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.1e-87 326.6 171 100.0
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.7e-76 287.7 173 90.2
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.2e-75 285.8 173 89.0
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 6.6e-72 274.2 173 85.0
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 6.8e-69 264.2 181 81.2
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.0e-68 262.7 181 81.2
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.4e-68 261.9 178 81.5
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.3e-64 249.2 173 80.9
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 5.2e-53 211.5 173 67.1
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.3e-40 169.5 173 54.9
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 7.3e-39 164.5 164 57.9
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 1.1e-37 160.6 164 56.1
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 6.9e-37 157.9 172 52.9
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 2.6e-36 156.0 175 52.0
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 5.4e-34 148.3 173 50.9
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.6e-33 146.7 173 54.3
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.6e-33 146.7 172 49.4
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.6e-33 146.7 171 49.1
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.3e-32 143.7 176 48.3
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 1.7e-32 143.3 175 50.3
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.7e-32 143.3 173 48.6
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 2.3e-32 142.9 179 52.0
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 8.7e-32 141.0 172 51.2
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 1.5e-31 140.2 174 47.1
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.3e-31 139.0 172 50.6
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.4e-29 133.7 164 49.4
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 2.0e-28 129.8 172 48.8
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 2.6e-28 129.4 173 49.7
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 9.9e-28 127.5 175 46.9
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.3e-27 127.1 173 50.3
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.7e-27 126.7 179 48.0
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 1.7e-27 126.7 173 49.1
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 4.9e-27 125.2 171 47.4
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.9e-27 125.2 173 47.4
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 6.4e-27 124.8 178 47.8
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 1.4e-26 123.6 158 51.3
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.9e-26 123.2 127 59.1
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 1.9e-26 123.2 174 44.8
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 5.4e-26 121.7 168 46.4
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.2e-25 120.6 174 46.6
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 2.1e-25 119.8 171 45.6
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 6.0e-25 118.2 173 45.1
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 3.0e-24 115.9 175 44.6
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 8.7e-24 114.4 171 40.9
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 8.7e-24 114.4 198 42.4
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.1e-23 114.0 129 52.7
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 2.5e-23 112.8 169 43.8
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 9.6e-23 110.9 164 45.1
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.1e-21 107.5 135 52.6
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 5.3e-21 105.1 115 51.3
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.2e-20 104.0 162 42.6
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 4.5e-20 102.1 183 41.0
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 7.6e-20 101.3 165 43.6
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 7.6e-20 101.3 165 41.2
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.3e-19 100.5 165 42.4
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 2.2e-19 99.8 165 41.8
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 6.5e-19 98.2 164 42.1
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 8.4e-19 97.8 107 51.4
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.4e-18 97.1 163 41.7
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.9e-18 96.7 163 42.9
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.5e-18 96.3 162 41.4
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 3.2e-18 95.9 173 38.7
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 5.1e-16 88.6 136 44.9
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 8.7e-16 87.8 132 44.7
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 1.1e-15 87.4 162 38.9
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 4.3e-15 85.5 136 44.1
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 5.7e-15 85.1 98 50.0
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 1.8e-13 80.1 111 47.7
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 5.3e-13 78.6 149 38.9
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 9.0e-13 77.8 132 42.4
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 1.3e-11 73.9 155 41.3
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.3e-11 73.9 168 35.7
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 6.5e-11 71.6 122 37.7
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 3.2e-10 69.3 113 44.2
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 7.1e-10 68.2 124 40.3
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 2.1e-09 66.6 143 36.4
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 3.5e-09 65.9 114 37.7
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.9e-07 60.1 80 48.8
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.6e-06 57.0 114 39.5


User provided reference genes

Program Settings