Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 9.9e-83 310.1 156 100.0
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 9.9e-83 310.1 156 100.0
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.2e-80 303.1 156 98.1
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 3.9e-23 112.1 107 62.6
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 5.1e-23 111.7 123 58.5
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 2.4e-20 102.8 167 45.5
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 3.5e-19 99.0 120 55.0
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.6e-16 90.1 151 41.7
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 1.1e-14 84.0 53 69.8
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 1.5e-14 83.6 39 89.7
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.0e-14 83.2 108 46.3
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 3.3e-14 82.4 67 62.7
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 4.4e-14 82.0 148 36.5
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.3e-13 80.5 43 83.7
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.3e-13 80.5 71 60.6
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.3e-13 80.5 71 60.6
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.3e-13 80.5 54 68.5
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.7e-13 80.1 134 41.8
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 2.8e-13 79.3 36 88.9
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 2.8e-13 79.3 53 66.0
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 3.7e-13 79.0 39 82.1
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.7e-13 79.0 138 45.7
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 3.7e-13 79.0 50 74.0
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 4.8e-13 78.6 47 72.3
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 4.8e-13 78.6 50 68.0
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 6.3e-13 78.2 41 78.0
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 6.3e-13 78.2 63 61.9
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 6.3e-13 78.2 36 88.9
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 8.2e-13 77.8 104 47.1
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 1.1e-12 77.4 53 75.5
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.4e-12 77.0 70 57.1
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.4e-12 77.0 70 57.1
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.8e-12 76.6 77 58.4
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.8e-12 76.6 43 72.1
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.8e-12 76.6 68 55.9
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.8e-12 76.6 35 88.6
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 2.4e-12 76.3 106 45.3
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.4e-12 76.3 105 46.7
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 3.1e-12 75.9 56 66.1
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 3.1e-12 75.9 106 46.2
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 3.1e-12 75.9 68 55.9
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 3.1e-12 75.9 101 47.5
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 4.1e-12 75.5 67 58.2
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 4.1e-12 75.5 70 55.7
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 4.1e-12 75.5 43 76.7
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 4.1e-12 75.5 107 43.9
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 5.3e-12 75.1 67 52.2
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 5.3e-12 75.1 124 44.4
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 5.3e-12 75.1 51 70.6
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 5.3e-12 75.1 109 48.6
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 7.0e-12 74.7 45 80.0
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 7.0e-12 74.7 137 39.4
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 7.0e-12 74.7 67 55.2
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 7.0e-12 74.7 47 70.2
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 9.1e-12 74.3 42 76.2
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 9.1e-12 74.3 42 73.8
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.2e-11 73.9 65 56.9
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.2e-11 73.9 151 38.4
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.6e-11 73.6 61 63.9
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.6e-11 73.6 83 51.8
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 2.0e-11 73.2 155 38.1
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 2.0e-11 73.2 47 68.1
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 2.0e-11 73.2 40 80.0
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 2.6e-11 72.8 114 43.9
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 3.5e-11 72.4 60 60.0
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.5e-11 72.4 130 37.7
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 3.5e-11 72.4 105 49.5
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 3.5e-11 72.4 50 64.0
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 4.5e-11 72.0 42 73.8
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 4.5e-11 72.0 42 73.8
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 4.5e-11 72.0 55 60.0
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 5.9e-11 71.6 71 53.5
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 5.9e-11 71.6 31 90.3
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.0e-10 70.9 67 58.2
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 1.3e-10 70.5 84 51.2
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.7e-10 70.1 89 47.2
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.7e-10 70.1 31 90.3
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.7e-10 70.1 47 66.0
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 2.2e-10 69.7 29 93.1
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.2e-10 69.7 123 39.0
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 2.9e-10 69.3 63 55.6
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 2.9e-10 69.3 34 76.5
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 2.9e-10 69.3 71 54.9
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 2.9e-10 69.3 64 54.7
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 3.8e-10 68.9 33 78.8
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 3.8e-10 68.9 159 35.2
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 3.8e-10 68.9 36 80.6
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 5.0e-10 68.6 143 33.6
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 5.0e-10 68.6 106 42.5
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.1e-09 67.4 85 49.4
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.5e-09 67.0 61 59.0
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.5e-09 67.0 61 59.0
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.9e-09 66.6 42 69.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 2.5e-09 66.2 29 89.7
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.5e-09 66.2 61 59.0
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 5.5e-09 65.1 33 78.8
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.2e-08 63.9 47 57.4
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 4.7e-08 62.0 68 47.1
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 6.1e-08 61.6 30 76.7
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 8.8e-07 57.8 46 54.3
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.2e-06 57.4 30 73.3
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 7.5e-06 54.7 34 70.6


User provided reference genes

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