Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 6.0e-36 153.7 79 100.0
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 1.6e-25 119.0 103 65.0
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 2.8e-25 118.2 103 65.0
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 2.8e-25 118.2 103 65.0
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 4.7e-25 117.5 103 64.1
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 8.1e-25 116.7 103 64.1
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 1.1e-24 116.3 103 64.1
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 1.1e-24 116.3 103 64.1
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.4e-24 115.2 103 63.1
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 5.2e-24 114.0 103 63.1
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.2e-23 112.8 103 62.1
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 1.2e-20 102.8 104 60.6
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 3.5e-20 101.3 103 60.2
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 3.5e-20 101.3 103 57.3
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 3.5e-20 101.3 103 60.2
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 4.6e-20 100.9 103 58.3
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 4.6e-20 100.9 103 60.2
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 6.0e-20 100.5 103 57.3
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 6.0e-20 100.5 103 60.2
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 7.8e-20 100.1 103 56.3
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 1.0e-19 99.8 103 57.3
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 1.0e-19 99.8 103 56.3
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 1.3e-19 99.4 103 58.3
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 1.3e-19 99.4 103 58.3
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 1.3e-19 99.4 104 57.7
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 2.3e-19 98.6 102 59.8
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 2.3e-19 98.6 102 59.8
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 2.3e-19 98.6 103 59.2
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 6.6e-19 97.1 103 57.3
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 6.6e-19 97.1 102 57.8
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 8.7e-19 96.7 102 54.9
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 1.5e-18 95.9 103 55.3
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 1.5e-18 95.9 103 55.3
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 1.5e-18 95.9 103 55.3
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 1.5e-18 95.9 103 57.3
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 1.9e-18 95.5 102 53.9
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 3.3e-18 94.7 103 55.3
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 3.3e-18 94.7 103 55.3
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 3.3e-18 94.7 103 56.3
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 4.3e-18 94.4 105 58.1
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 56.3
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 54.4
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 54.4
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 54.4
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 54.4
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 54.4
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 54.4
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 7.3e-18 93.6 103 54.4
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 7.3e-18 93.6 104 54.8
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 9.6e-18 93.2 102 54.9
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 9.6e-18 93.2 103 56.3
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-17 92.8 104 55.8
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 1.3e-17 92.8 102 54.9
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 1.6e-17 92.4 103 54.4
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 1.6e-17 92.4 103 53.4
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 1.6e-17 92.4 103 54.4
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 1.6e-17 92.4 103 54.4
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 1.6e-17 92.4 104 53.8
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 2.8e-17 91.7 103 53.4
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.8e-17 91.7 105 54.3
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 2.8e-17 91.7 103 55.3
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.8e-17 91.7 103 51.5
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 2.8e-17 91.7 103 51.5
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 6.2e-17 90.5 105 56.2
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 6.2e-17 90.5 100 50.0
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 8.1e-17 90.1 103 52.4
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 1.1e-16 89.7 102 52.0
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 1.1e-16 89.7 102 52.0
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 1.4e-16 89.4 105 54.3
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 1.4e-16 89.4 103 50.5
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 1.4e-16 89.4 103 50.5
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 1.8e-16 89.0 103 55.3
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 1.8e-16 89.0 103 54.4
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 1.8e-16 89.0 103 54.4
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 2.4e-16 88.6 103 52.4
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 4.0e-16 87.8 103 53.4
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 5.3e-16 87.4 103 50.5
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 5.3e-16 87.4 103 51.5
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 5.3e-16 87.4 106 52.8
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 1.2e-15 86.3 103 51.5
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 2.0e-15 85.5 100 54.0
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 2.6e-15 85.1 103 52.4
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 3.4e-15 84.7 107 50.5
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 3.4e-15 84.7 103 53.4
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 3.4e-15 84.7 103 50.5
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 4.5e-15 84.3 103 50.5
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 7.6e-15 83.6 107 51.4
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 9.9e-15 83.2 103 50.5
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 9.9e-15 83.2 103 51.5
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 9.9e-15 83.2 104 52.9
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 1.3e-14 82.8 98 51.0
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 1.3e-14 82.8 103 50.5
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 2.2e-14 82.0 106 50.0
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 2.2e-14 82.0 106 50.0
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 2.2e-14 82.0 105 52.4
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 2.9e-14 81.6 106 50.0
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 2.9e-14 81.6 106 50.0
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 2.9e-14 81.6 103 50.5
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 3.8e-14 81.3 106 49.1
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 8.4e-14 80.1 106 49.1
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 1.4e-13 79.3 101 49.5
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 1.9e-13 79.0 104 50.0
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 2.4e-13 78.6 94 53.2
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 3.2e-13 78.2 103 48.5
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 4.2e-13 77.8 104 50.0
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 1.6e-12 75.9 92 53.3
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 2.1e-12 75.5 94 51.1
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 2.1e-12 75.5 82 53.7
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 2.7e-12 75.1 94 51.1
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 2.7e-12 75.1 103 46.6
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 1.3e-11 72.8 104 48.1
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 3.0e-11 71.6 85 51.8
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 3.0e-11 71.6 85 51.8
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 3.9e-11 71.2 103 44.7
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 1.5e-10 69.3 96 43.8
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 1.5e-10 69.3 98 44.9
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 7.4e-10 67.0 86 47.7
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 1.3e-09 66.2 96 42.7
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 8.1e-09 63.5 73 52.1
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 5.3e-08 60.8 98 42.9
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 1.5e-07 59.3 73 47.9
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 5.8e-07 57.4 84 51.2
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 2.2e-06 55.5 69 47.8
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 3.8e-06 54.7 85 41.2


User provided reference genes

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