Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 3.0e-81 305.1 148 100.0
Gohir.A01G042800 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.8e-78 295.8 148 97.3
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.4e-78 295.4 148 98.0
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.6e-72 275.4 148 91.2
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 4.4e-72 274.6 148 91.2
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 5.7e-72 274.2 148 89.2
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.3e-71 273.1 148 89.2
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.3e-71 273.1 148 89.2
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.8e-70 269.2 148 89.9
Gohir.A01G042900 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.7e-66 255.4 148 83.8
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 8.0e-66 253.8 148 83.1
Gohir.D01G033500 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.8e-65 252.7 148 83.1
Gorai.002G040900 Gossypium raimondii HOM05D008142 ORTHO05D009674 7.2e-51 204.1 149 69.1
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 1.6e-50 203.0 151 72.2
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.7e-47 193.0 152 67.8
Gohir.A01G043200 Gossypium hirsutum HOM05D008142 ORTHO05D009674 4.8e-47 191.4 149 65.8
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 5.6e-27 124.8 165 44.8
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 4.4e-16 88.6 173 41.0
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.3e-15 87.0 174 33.3
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.3e-15 87.0 154 39.6
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 6.4e-15 84.7 165 39.4
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 8.3e-15 84.3 174 32.2
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 8.3e-15 84.3 154 37.0
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 8.3e-15 84.3 154 37.0
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 3.2e-14 82.4 154 36.4
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 3.2e-14 82.4 174 37.9
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 4.1e-14 82.0 154 37.0
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 5.4e-14 81.6 166 38.0
COL.COLO4_17430 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.2e-13 80.5 148 39.2
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 1.6e-13 80.1 139 36.0
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 1.6e-13 80.1 145 38.6
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 4.6e-13 78.6 140 40.7
Ciclev10022628m.g Citrus clementina HOM05D008142 ORTHO05D009674 6.0e-13 78.2 157 38.9
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 6.0e-13 78.2 175 36.6
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 7.8e-13 77.8 170 35.9
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 2.3e-12 76.3 161 36.6
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 3.0e-12 75.9 165 33.9
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 3.0e-12 75.9 177 37.3
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 6.6e-12 74.7 177 32.2
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 1.5e-11 73.6 176 35.8
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 3.3e-11 72.4 168 34.5
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 1.6e-10 70.1 153 35.3
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 2.1e-10 69.7 153 35.9
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 2.1e-10 69.7 162 33.3
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 8.1e-10 67.8 152 32.2
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 1.8e-09 66.6 162 35.8
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 1.8e-09 66.6 175 33.1
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 2.0e-08 63.2 177 31.1
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 4.4e-08 62.0 169 32.5
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 5.8e-08 61.6 164 32.9
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 5.8e-08 61.6 118 34.7
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 9.9e-08 60.8 182 33.0
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 9.9e-08 60.8 183 30.6
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 9.9e-08 60.8 178 30.9
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 1.3e-07 60.5 165 31.5
Cpa.g.sc714.2 Carica papaya HOM05D008142 ORTHO05D009674 1.7e-07 60.1 117 41.9
Phvul.005G061700 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 2.2e-07 59.7 126 34.9
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 2.2e-07 59.7 176 30.7
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 6.4e-07 58.2 136 33.1
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 1.1e-06 57.4 136 31.6
Glyma.13G260100 Glycine max HOM05D010689 ORTHO05D012855 1.1e-06 57.4 125 32.8
Thecc.07G144300 Theobroma cacao HOM05D023069 ORTHO05D009674 1.1e-06 57.4 137 35.8
Phvul.005G061900 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 3.2e-06 55.8 119 31.9
Glyma.15G247900 Glycine max HOM05D010689 ORTHO05D012855 4.2e-06 55.5 136 30.9
Phvul.005G062100 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 4.2e-06 55.5 119 32.8
TAR627G0610 Trochodendron aralioides HOM05D008142 ORTHO05D009674 5.4e-06 55.1 71 40.8
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 9.2e-06 54.3 157 31.2
TPR.G26609 Trifolium pratense HOM05D010689 ORTHO05D012855 9.2e-06 54.3 123 30.9


User provided reference genes

Program Settings