Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 6.6e-279 963.4 478 100.0
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.0e-272 941.8 482 97.3
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 6.4e-250 867.1 484 88.0
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 3.1e-244 848.2 461 88.9
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 5.5e-225 784.3 464 80.6
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 2.3e-223 778.9 464 80.0
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 8.7e-223 776.9 481 78.2
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.1e-222 776.5 463 80.8
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.3e-221 773.1 464 78.7
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 3.7e-221 771.5 465 78.9
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.8e-220 769.2 464 80.2
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 2.4e-220 768.8 460 80.2
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 4.1e-220 768.1 464 77.4
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.2e-219 766.5 464 78.7
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 2.0e-219 765.8 463 79.0
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 8.4e-218 760.4 488 75.8
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.9e-217 759.2 464 78.2
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 9.3e-217 756.9 466 75.3
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 2.1e-216 755.7 466 77.0
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.7e-216 755.4 398 94.7
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.0e-215 753.4 464 77.2
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.0e-215 753.4 476 74.8
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 3.9e-215 751.5 466 77.9
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.5e-214 749.6 475 76.2
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.9e-214 749.2 465 77.4
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 1.9e-214 749.2 466 76.6
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 2.2e-213 745.7 478 74.5
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 2.8e-213 745.3 471 74.9
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 3.7e-213 745.0 460 77.0
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 6.3e-213 744.2 460 77.0
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.8e-212 742.7 460 76.3
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 6.9e-212 740.7 463 76.5
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 6.9e-212 740.7 460 76.3
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.2e-211 740.0 464 74.8
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.0e-211 739.2 466 76.0
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 7.7e-211 737.3 506 70.2
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 2.2e-210 735.7 464 75.0
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 2.2e-210 735.7 460 75.4
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.4e-209 733.0 496 71.6
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.5e-209 732.3 465 74.8
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 2.5e-209 732.3 504 70.6
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 5.5e-209 731.1 501 72.3
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.6e-208 729.6 460 74.8
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.7e-208 728.8 499 70.9
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.4e-207 726.5 460 74.3
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 3.3e-206 721.8 461 74.6
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.4e-204 716.5 492 70.7
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 5.3e-204 714.5 466 73.0
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 6.9e-204 714.1 550 66.4
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 2.2e-202 709.1 465 72.5
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 1.9e-201 706.1 461 73.5
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.9e-201 706.1 460 73.5
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.2e-195 686.8 542 63.5
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 2.0e-195 686.0 463 71.5
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 2.9e-194 682.2 505 65.7
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 6.1e-192 674.5 464 71.3
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 1.3e-189 666.8 401 78.3
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 1.2e-187 660.2 462 67.1
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.0e-183 647.1 462 66.7
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 3.0e-183 645.6 392 78.8
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.5e-182 643.3 466 68.2
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.8e-181 639.0 466 66.7
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 3.7e-181 638.6 476 65.8
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.8e-180 636.3 462 65.6
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 1.2e-179 633.6 459 65.1
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.9e-177 626.3 399 74.2
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.9e-177 626.3 399 74.2
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.2e-176 623.6 402 73.9
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.0e-175 620.5 463 64.8
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.8e-173 612.5 421 70.3
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 2.9e-170 602.4 466 65.2
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 3.6e-168 595.5 463 63.1
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 4.0e-167 592.0 491 61.7
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.5e-166 590.1 378 74.6
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 7.0e-164 581.3 473 61.7
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.9e-161 573.2 364 75.8
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 4.6e-155 552.0 328 80.2
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.3e-146 523.9 332 75.0
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.3e-146 523.1 367 69.2
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.4e-143 513.8 384 69.3
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 7.1e-116 421.8 268 74.3
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 3.3e-105 386.3 238 76.9
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 1.5e-73 281.2 171 77.2
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.0e-66 256.5 447 32.4
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 5.2e-58 229.6 154 72.1
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 2.5e-52 210.7 235 54.5
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.2e-51 208.4 159 68.6
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 3.6e-43 180.3 118 71.2
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 7.8e-30 136.0 426 25.6
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.1e-26 124.0 77 74.0
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 2.3e-21 107.8 387 24.8
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 9.9e-17 92.4 388 24.5
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.3e-16 92.0 335 26.0
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 8.4e-16 89.4 57 73.7
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 3.6e-11 73.9 425 23.8
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 9.9e-09 65.9 50 58.0
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 8.4e-08 62.8 351 24.5


User provided reference genes

Program Settings