Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D13G133033 Gossypium hirsutum HOM05D000657 ORTHO05D029186 5.0e-48 194.1 98 100.0
Gohir.D10G144250 Gossypium hirsutum HOM05D000657 ORTHO05D029186 6.9e-42 173.7 96 94.8
Gorai.001G201000 Gossypium raimondii HOM05D000657 ORTHO05D029186 1.6e-38 162.5 96 91.7
Gohir.D11G118900 Gossypium hirsutum HOM05D000657 ORTHO05D002092 2.6e-12 75.5 38 100.0
Gorai.007G127400 Gossypium raimondii HOM05D000657 ORTHO05D002092 2.6e-12 75.5 38 100.0
Ciclev10024146m.g Citrus clementina HOM05D000657 ORTHO05D002092 9.8e-12 73.6 38 97.4
Duzib138G0691 Durio zibethinus HOM05D000657 ORTHO05D002092 2.2e-11 72.4 38 94.7
Duzib211G0324 Durio zibethinus HOM05D000657 ORTHO05D002092 2.2e-11 72.4 38 94.7
COL.COLO4_23327 Corchorus olitorius HOM05D000657 ORTHO05D002092 4.8e-11 71.2 38 92.1
Potri.014G127400 Populus trichocarpa HOM05D000657 ORTHO05D002092 4.8e-11 71.2 38 92.1
Thecc.01G303000 Theobroma cacao HOM05D000657 ORTHO05D002092 4.8e-11 71.2 38 92.1
Cpa.g.sc151.13 Carica papaya HOM05D000657 ORTHO05D002092 6.3e-11 70.9 38 92.1
TWI14G0471 Tripterygium wilfordii HOM05D000657 ORTHO05D002092 6.3e-11 70.9 38 92.1
QL12p028253 Quercus lobata HOM05D000657 ORTHO05D002092 8.3e-11 70.5 37 91.9
arahy.Tifrunner.gnm1.ann1.415NE5 Arachis hypogaea HOM05D000657 ORTHO05D002092 1.4e-10 69.7 38 89.5
Glyma.03G215200 Glycine max HOM05D000657 ORTHO05D002092 1.4e-10 69.7 38 89.5
Glyma.14G001400 Glycine max HOM05D000657 ORTHO05D002092 1.4e-10 69.7 38 89.5
Manes.01G221100 Manihot esculenta HOM05D000657 ORTHO05D002092 1.4e-10 69.7 38 86.8
Gohir.A12G129500 Gossypium hirsutum HOM05D000657 ORTHO05D002092 1.8e-10 69.3 38 92.1
Lj1g0020883 Lotus japonicus HOM05D000657 ORTHO05D002092 1.8e-10 69.3 38 89.5
Atru.chr5.1125 Acer truncatum HOM05D000657 ORTHO05D002092 2.4e-10 68.9 38 89.5
Ca_09180_v3 Cicer arietinum L. HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 86.8
Ca_30607_v3 Cicer arietinum L. HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 86.8
Gorai.008G144200 Gossypium raimondii HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 89.5
Lalb_Chr15g0078471 Lupinus albus HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 86.8
Medtr7g108785 Medicago truncatula HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 86.8
Psat3g021680 Pisum sativum HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 86.8
TPR.G9601 Trifolium pratense HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 86.8
VMungo1383G2636 Vigna mungo HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 86.8
GSVIVG01028035001 Vitis vinifera HOM05D000657 ORTHO05D002092 3.1e-10 68.6 38 89.5
CiPaw.01G027800 Carya illinoinensis HOM05D000657 ORTHO05D002092 4.1e-10 68.2 38 89.5
Phvul.001G208100 Phaseolus vulgaris HOM05D000657 ORTHO05D002092 4.1e-10 68.2 38 86.8
Potri.002G203200 Populus trichocarpa HOM05D000657 ORTHO05D002092 7.0e-10 67.4 38 86.8
Gohir.D12G133300 Gossypium hirsutum HOM05D000657 ORTHO05D002092 9.1e-10 67.0 37 89.2
Prupe.8G263500 Prunus persica HOM05D000657 ORTHO05D002092 9.1e-10 67.0 38 84.2
Cc01_g21000 Coffea canephora HOM05D000657 ORTHO05D002092 1.6e-09 66.2 38 84.2
ECA236G1902 Erigeron canadensis HOM05D000657 ORTHO05D002092 1.6e-09 66.2 38 81.6
Peaxi162Scf00001g00402 Petunia axillaris HOM05D000657 ORTHO05D002092 1.6e-09 66.2 38 84.2
TWI59G0509 Tripterygium wilfordii HOM05D000657 ORTHO05D002092 1.6e-09 66.2 36 86.1
Aqoxy5G00768 Aquilegia oxysepala HOM05D000657 ORTHO05D002092 2.0e-09 65.9 38 84.2
Haze_04955 Corylus avellana HOM05D000657 ORTHO05D002092 2.0e-09 65.9 38 86.8
CiPaw.08G094100 Carya illinoinensis HOM05D000657 ORTHO05D002092 2.7e-09 65.5 38 84.2
Oeu053604.1 Olea europaea HOM05D000657 ORTHO05D002092 2.7e-09 65.5 38 84.2
Sopen09g030070 Solanum pennellii HOM05D000657 ORTHO05D002092 2.7e-09 65.5 38 81.6
Lsat_1_v5_gn_8_163840 Lactuca sativa HOM05D000657 ORTHO05D002092 3.5e-09 65.1 38 81.6
TAR636G0591 Trochodendron aralioides HOM05D000657 ORTHO05D002092 3.5e-09 65.1 38 84.2
MD03G1290500 Malus domestica HOM05D000657 ORTHO05D002092 4.5e-09 64.7 35 85.7
Sabra02G0156200 Salix brachista HOM05D000657 ORTHO05D002092 4.5e-09 64.7 38 81.6
CAN.G472.17 Capsicum annuum HOM05D000657 ORTHO05D002092 5.9e-09 64.3 38 78.9
Cfa005896 Carpinus fangiana HOM05D000657 ORTHO05D002092 5.9e-09 64.3 38 84.2
FAN20G2253 Fragaria x ananassa HOM05D000657 ORTHO05D002092 5.9e-09 64.3 38 81.6
RcHm_v2.0_Chr6g0294231 Rosa chinensis HOM05D000657 ORTHO05D002092 5.9e-09 64.3 38 78.9
Solyc09g075280.2 Solanum lycopersicum HOM05D000657 ORTHO05D002092 5.9e-09 64.3 38 78.9
A09p01820 Brassica napus HOM05D000657 ORTHO05D002092 1.0e-08 63.5 38 78.9
C09p01870 Brassica napus HOM05D000657 ORTHO05D002092 1.0e-08 63.5 38 78.9
BolC9t53122H Brassica oleracea HOM05D000657 ORTHO05D002092 1.0e-08 63.5 38 78.9
CARHR250540 Cardamine hirsuta HOM05D000657 ORTHO05D002092 1.0e-08 63.5 37 81.1
SGA_v2.0_scaffold36G14337 Striga asiatica HOM05D000657 ORTHO05D002092 1.3e-08 63.2 38 81.6
ClCG09G005670 Citrullus lanatus HOM05D000657 ORTHO05D002092 1.7e-08 62.8 38 84.2
MELO3C000736.2 Cucumis melo HOM05D000657 ORTHO05D029186 1.7e-08 62.8 38 84.2
CsaV3_7G029390 Cucumis sativus L. HOM05D000657 ORTHO05D002092 1.7e-08 62.8 38 84.2
FAN15G1975 Fragaria x ananassa HOM05D000657 ORTHO05D002092 1.7e-08 62.8 37 78.4
FAN24G3483 Fragaria x ananassa HOM05D000657 ORTHO05D002092 1.7e-08 62.8 37 78.4
HanXRQChr04g0114821 Helianthus annuus HOM05D000657 ORTHO05D002092 1.7e-08 62.8 35 82.9
Lj2P1197T40 Lonicera japonica HOM05D000657 ORTHO05D002092 1.7e-08 62.8 38 78.9
Nitab4.5_0000116g0470 Nicotiana tabacum HOM05D000657 ORTHO05D002092 1.7e-08 62.8 38 78.9
Nitab4.5_0006459g0020 Nicotiana tabacum HOM05D000657 ORTHO05D002092 1.7e-08 62.8 38 78.9
Sed0013016 Sechium edule HOM05D000657 ORTHO05D002092 1.7e-08 62.8 38 84.2
Sed0022619 Sechium edule HOM05D000657 ORTHO05D002092 1.7e-08 62.8 38 84.2
HPP92_010679 Vanilla planifolia HOM05D000657 ORTHO05D002092 1.7e-08 62.8 37 81.1
Aa31LG5G1990 Aethionema arabicum HOM05D000657 ORTHO05D002092 2.2e-08 62.4 37 78.4
AL6G50770 Arabidopsis lyrata HOM05D000657 ORTHO05D002092 2.2e-08 62.4 37 78.4
AT4G02350 Arabidopsis thaliana HOM05D000657 ORTHO05D002092 2.2e-08 62.4 37 78.4
BcaB01g02054 Brassica carinata HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
BcaB05g23617 Brassica carinata HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
BcaC03g16115 Brassica carinata HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
BcaNung04045 Brassica carinata HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
A02p24620 Brassica napus HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
C02p38860 Brassica napus HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
BolC2t09901H Brassica oleracea HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
BraA02t07454Z Brassica rapa HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
CANSAT25G2454 Cannabis sativa HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 81.6
Carub.0006s3482 Capsella rubella HOM05D000657 ORTHO05D002092 2.2e-08 62.4 37 78.4
DCAR_002847 Daucus carota HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 78.9
MD11G1308000 Malus domestica HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 76.3
SalBow6G2161 Salvia bowleyana HOM05D000657 ORTHO05D002092 2.2e-08 62.4 38 78.9
THA.LOC104825966 Tarenaya hassleriana HOM05D000657 ORTHO05D002092 2.2e-08 62.4 37 78.4
MSTRG.18142 Avicennia marina HOM05D000657 ORTHO05D002092 2.9e-08 62.0 38 76.3
CSS0023789 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 2.9e-08 62.0 38 78.9
FvH4_2g25910 Fragaria vesca HOM05D000657 ORTHO05D002092 2.9e-08 62.0 38 76.3
MSTRG.17400 Avicennia marina HOM05D000657 ORTHO05D002092 5.0e-08 61.2 38 76.3
BraA09t35836Z Brassica rapa HOM05D000657 ORTHO05D002092 5.0e-08 61.2 38 73.7
Migut.N01511 Erythranthe guttata HOM05D000657 ORTHO05D002092 5.0e-08 61.2 38 76.3
Thhalv10028425m.g Eutrema salsugineum HOM05D000657 ORTHO05D002092 5.0e-08 61.2 37 75.7
Rhsim01G0286500 Rhododendron simsii HOM05D000657 ORTHO05D002092 5.0e-08 61.2 38 78.9
Hma1.2p1_0494F.1_g165310 Hydrangea macrophylla HOM05D000657 ORTHO05D002092 6.5e-08 60.8 38 78.9
CSS0017483 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 1.5e-07 59.7 38 76.3
CSS0031963 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 1.5e-07 59.7 38 76.3
CSS0037234 Camellia sinensis var. sinensis HOM05D000657 ORTHO05D002092 1.5e-07 59.7 38 76.3
Sp6g02230 Schrenkiella parvula HOM05D000657 ORTHO05D002092 1.5e-07 59.7 37 75.7
Aqoxy2G02924 Aquilegia oxysepala HOM05D000657 ORTHO05D002092 1.9e-07 59.3 38 71.1
PGR119G1516 Punica granatum HOM05D000657 ORTHO05D002092 2.5e-07 58.9 38 73.7
SHI15128 Sapria himalayana HOM05D000657 ORTHO05D002092 3.2e-07 58.5 38 71.1
Eucgr.H01100 Eucalyptus grandis HOM05D000657 ORTHO05D002092 9.4e-07 57.0 38 71.1
PSO170G0313 Papaver somniferum HOM05D000657 ORTHO05D002092 9.4e-07 57.0 35 74.3
PSO407G0226 Papaver somniferum HOM05D000657 ORTHO05D002092 9.4e-07 57.0 35 74.3
PSO210G7374 Papaver somniferum HOM05D000657 ORTHO05D002092 2.1e-06 55.8 38 68.4
PSO832G3192 Papaver somniferum HOM05D000657 ORTHO05D002092 2.1e-06 55.8 38 68.4
ATR0796G335 Amborella trichopoda HOM05D000657 ORTHO05D002092 8.0e-06 53.9 40 62.5
Os01g0351300 Oryza sativa ssp. japonica HOM05D000657 ORTHO05D002092 8.0e-06 53.9 37 70.3
Zm00001eb131510 Zea mays HOM05D000657 ORTHO05D002092 8.0e-06 53.9 37 70.3
Zm00001eb341010 Zea mays HOM05D000657 ORTHO05D002092 8.0e-06 53.9 37 70.3


User provided reference genes

Program Settings