Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 0.0e+00 1145.2 595 100.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 0.0e+00 1117.8 598 97.7
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.8e-311 1071.2 592 95.3
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 1.4e-174 617.1 650 58.2
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.2e-174 615.9 663 56.7
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.2e-152 544.3 631 53.6
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.2e-101 374.8 345 64.3
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.2e-81 306.6 359 52.4
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.6e-80 303.1 359 51.8
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.6e-80 303.1 359 51.8
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.4e-76 290.8 610 38.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.3e-71 275.0 627 36.8
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 2.1e-69 267.7 649 36.4
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 9.0e-68 262.3 601 36.3
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 5.8e-67 259.6 596 36.9
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 4.3e-62 243.4 593 37.1
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.1e-61 241.1 464 38.8
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.1e-61 241.1 609 36.6
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 3.7e-61 240.4 707 31.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 2.4e-60 237.7 545 37.2
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 4.6e-56 223.4 633 32.7
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.8e-55 221.5 640 32.3
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.8e-55 221.5 627 34.6
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.1e-54 218.8 614 33.6
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.6e-53 214.9 615 33.8
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-53 214.5 618 34.1
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 8.2e-53 212.6 615 34.5
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.0e-52 209.1 617 33.4
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 5.9e-51 206.5 599 33.9
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 7.6e-51 206.1 614 31.3
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-50 205.3 639 32.4
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 2.9e-50 204.1 642 32.2
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 6.5e-50 203.0 589 32.6
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.6e-48 197.2 712 30.3
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.3e-47 195.3 610 30.5
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.5e-46 191.0 625 30.6
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 3.7e-45 187.2 550 33.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.3e-45 186.4 616 31.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.4e-44 185.3 541 33.8
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 3.4e-43 180.6 618 30.1
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.6e-40 171.8 379 35.1
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 2.1e-40 171.4 365 36.2
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.6e-40 170.2 732 29.1
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.3e-39 167.9 352 36.9
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 5.1e-39 166.8 591 27.9
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.1e-39 166.8 699 27.9
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 5.7e-38 163.3 626 28.4
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 7.4e-38 162.9 322 38.8
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.3e-37 162.2 642 28.2
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 3.7e-37 160.6 319 37.6
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 6.3e-37 159.8 344 35.8
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 6.3e-37 159.8 625 31.0
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.1e-36 159.1 356 35.7
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.4e-36 158.7 359 36.5
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.8e-36 158.3 626 29.1
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 2.4e-36 157.9 150 56.0
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 4.1e-36 157.1 130 64.6
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 9.1e-36 156.0 203 49.8
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 9.1e-36 156.0 630 28.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.2e-35 155.6 225 44.9
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.0e-35 154.8 637 27.6
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 3.4e-35 154.1 319 36.4
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 5.9e-35 153.3 130 57.7
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 7.7e-35 152.9 645 28.1
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.9e-34 151.0 460 32.4
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 5.0e-34 150.2 373 33.8
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.9e-33 148.3 765 27.7
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.9e-33 148.3 115 63.5
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 4.2e-33 147.1 175 49.7
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 3.6e-32 144.1 631 28.5
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.0e-31 142.5 514 29.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.3e-31 141.4 590 29.7
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.5e-30 138.7 300 38.0
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 7.4e-30 136.3 590 27.3
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 2.2e-29 134.8 403 32.8
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.2e-27 129.0 593 28.2
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.0e-27 128.3 465 28.8
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 3.5e-27 127.5 590 27.1
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 3.5e-27 127.5 592 27.0
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 5.9e-27 126.7 314 34.7
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.7e-26 125.2 617 26.9
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.5e-25 122.1 448 29.9
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.5e-25 122.1 466 27.5
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.1e-24 118.2 511 29.2
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.7e-24 117.9 437 29.3
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 5.2e-23 113.6 517 28.6
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.5e-22 112.1 205 39.0
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 4.4e-22 110.5 597 26.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 4.4e-22 110.5 617 25.3
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.4e-22 110.5 212 37.3
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 5.7e-22 110.2 619 26.3
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 5.7e-22 110.2 385 30.1
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 7.5e-22 109.8 770 24.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.7e-19 101.3 380 29.2
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 7.7e-19 99.8 459 28.5
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 8.5e-18 96.3 521 23.4
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.2e-17 94.4 66 69.7
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.2e-16 92.4 266 30.8
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 8.0e-16 89.7 97 45.4
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.5e-14 85.5 193 31.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.6e-14 84.7 143 38.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.6e-14 84.7 143 38.5
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.2e-13 81.6 128 35.9
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.8e-12 78.6 289 27.0
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 4.5e-11 73.9 128 32.8
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 2.5e-09 68.2 251 25.9
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 4.2e-09 67.4 654 23.9
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.1e-08 65.1 306 26.1
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 8.0e-08 63.2 165 33.3
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 5.2e-07 60.5 126 34.9
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 7.5e-06 56.6 91 33.0
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 7.5e-06 56.6 130 26.2


User provided reference genes

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