Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D05G016600 Gossypium hirsutum HOM05D006756 ORTHO05D001869 2.0e-206 722.2 366 100.0
Duzib168G2156 Durio zibethinus HOM05D006756 ORTHO05D001869 3.8e-117 425.6 485 54.0
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 6.7e-114 414.8 494 51.8
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 1.9e-113 413.3 494 51.6
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 5.6e-113 411.8 494 51.4
Thecc.09G128500 Theobroma cacao HOM05D006756 ORTHO05D001869 4.9e-109 398.7 492 52.0
Duzib150G0144 Durio zibethinus HOM05D006756 ORTHO05D001869 1.8e-87 327.0 345 55.9
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 7.5e-73 278.5 498 40.8
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 6.5e-69 265.4 500 38.8
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 6.5e-61 238.8 531 35.4
Manes.14G133500 Manihot esculenta HOM05D006756 ORTHO05D001869 3.2e-60 236.5 494 37.2
Sabra18G0110400 Salix brachista HOM05D006756 ORTHO05D001869 1.2e-59 234.6 485 38.1
Duzib187G1404 Durio zibethinus HOM05D006756 ORTHO05D001869 8.0e-59 231.9 324 49.4
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 8.0e-59 231.9 486 37.4
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 8.8e-58 228.4 524 36.1
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 3.1e-55 219.9 483 34.8
Prupe.7G245100 Prunus persica HOM05D006756 ORTHO05D001869 1.0e-53 214.9 496 34.1
TWI34G1307 Tripterygium wilfordii HOM05D006756 ORTHO05D001869 5.0e-53 212.6 496 34.3
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 1.5e-52 211.1 484 35.5
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 3.6e-51 206.5 483 33.5
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.5e-49 201.1 532 32.3
Cfa003391 Carpinus fangiana HOM05D006756 ORTHO05D001869 2.4e-47 193.7 487 32.2
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 1.3e-45 188.0 520 32.9
CSS0003155 Camellia sinensis var. sinensis HOM05D006756 ORTHO05D001869 8.6e-45 185.3 505 33.5
COL.COLO4_35103 Corchorus olitorius HOM05D006756 ORTHO05D001869 3.6e-43 179.9 271 46.9
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 1.2e-41 174.9 488 32.0
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 1.2e-41 174.9 527 29.8
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 1.5e-41 174.5 517 29.2
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 9.8e-41 171.8 464 32.8
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 1.7e-40 171.0 485 32.2
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 1.1e-39 168.3 504 32.5
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 7.0e-39 165.6 494 30.6
CsaV3_1G030330 Cucumis sativus L. HOM05D006756 ORTHO05D001869 7.0e-39 165.6 495 31.3
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 7.0e-39 165.6 479 30.9
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 4.6e-38 162.9 471 31.2
Psat1g024440 Pisum sativum HOM05D006756 ORTHO05D001869 6.0e-38 162.5 492 29.9
Eucgr.C01517 Eucalyptus grandis HOM05D006756 ORTHO05D001869 7.8e-38 162.2 468 32.7
Sed0004031 Sechium edule HOM05D006756 ORTHO05D001869 1.0e-37 161.8 458 31.2
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 2.3e-37 160.6 490 30.0
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 2.3e-37 160.6 434 33.2
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 6.6e-37 159.1 493 30.6
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 6.6e-37 159.1 494 32.4
FvH4_1g03050 Fragaria vesca HOM05D006756 ORTHO05D001869 1.1e-36 158.3 489 32.3
Haze_25558 Corylus avellana HOM05D006756 ORTHO05D001869 1.6e-35 154.5 587 26.7
PGR142G2180 Punica granatum HOM05D006756 ORTHO05D001869 1.1e-34 151.8 454 30.8
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 8.9e-34 148.7 499 30.5
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 8.9e-34 148.7 473 29.2
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 2.2e-32 144.1 493 29.6
Lj1g0024911 Lotus japonicus HOM05D006756 ORTHO05D001869 3.7e-32 143.3 488 29.7
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 3.7e-32 143.3 376 32.4
Medtr7g033910 Medicago truncatula HOM05D006756 ORTHO05D001869 1.9e-31 141.0 490 28.0
Oeu058044.1 Olea europaea HOM05D006756 ORTHO05D001869 5.4e-31 139.4 517 29.8
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 1.0e-29 135.2 499 29.3
PSO170G5619 Papaver somniferum HOM05D006756 ORTHO05D001869 1.0e-29 135.2 497 29.8
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 1.0e-29 135.2 401 30.7
BcaC04g19408 Brassica carinata HOM05D006756 ORTHO05D001869 8.6e-29 132.1 443 30.5
Lsat_1_v5_gn_8_58441 Lactuca sativa HOM05D006756 ORTHO05D001869 1.5e-28 131.3 437 31.6
TPR.G9536 Trifolium pratense HOM05D006756 ORTHO05D001869 1.9e-28 131.0 492 28.5
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 9.5e-28 128.6 436 30.7
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 1.6e-27 127.9 499 27.9
Sp6g24200 Schrenkiella parvula HOM05D006756 ORTHO05D001869 2.8e-27 127.1 457 31.1
Carub.0006s1860 Capsella rubella HOM05D006756 ORTHO05D001869 8.1e-27 125.6 493 27.8
AL6G31760 Arabidopsis lyrata HOM05D006756 ORTHO05D001869 1.1e-26 125.2 499 27.7
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 1.8e-26 124.4 473 28.8
Sed0021917 Sechium edule HOM05D006756 ORTHO05D001869 2.3e-26 124.0 384 29.4
Dinv41496 Davidia involucrata HOM05D006756 ORTHO05D001869 3.1e-26 123.6 330 33.0
Migut.K00444 Erythranthe guttata HOM05D006756 ORTHO05D001869 4.0e-26 123.2 477 27.5
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 5.2e-26 122.9 491 29.1
CARHR192620 Cardamine hirsuta HOM05D006756 ORTHO05D001869 2.0e-25 120.9 464 28.9
Phvul.009G207200 Phaseolus vulgaris HOM05D006756 ORTHO05D001869 3.4e-25 120.2 419 27.9
BcaC03g13743 Brassica carinata HOM05D006756 ORTHO05D001869 7.6e-25 119.0 497 28.4
BraA10t44048Z Brassica rapa HOM05D006756 ORTHO05D001869 9.9e-25 118.6 495 27.1
AT5G20200 Arabidopsis thaliana HOM05D006756 ORTHO05D001869 2.2e-24 117.5 496 27.2
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 8.4e-24 115.5 498 26.9
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 8.4e-24 115.5 611 26.7
BcaB05g22863 Brassica carinata HOM05D006756 ORTHO05D001869 2.4e-23 114.0 380 28.9
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 2.4e-23 114.0 305 31.5
Thhalv10012771m.g Eutrema salsugineum HOM05D006756 ORTHO05D001869 3.2e-23 113.6 464 29.3
Cc06_g08320 Coffea canephora HOM05D006756 ORTHO05D001869 1.6e-22 111.3 512 27.0
SGA_v2.0_scaffold464G52008 Striga asiatica HOM05D006756 ORTHO05D001869 3.5e-22 110.2 468 28.2
BcaB08g36540 Brassica carinata HOM05D006756 ORTHO05D001869 6.0e-22 109.4 371 31.3
AUR62011148 Chenopodium quinoa HOM05D006756 ORTHO05D001869 2.3e-21 107.5 368 28.3
ECA236G0350 Erigeron canadensis HOM05D006756 ORTHO05D001869 2.3e-21 107.5 465 28.0
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 2.3e-21 107.5 437 28.1
Glyma.06G217600 Glycine max HOM05D006756 ORTHO05D001869 3.3e-20 103.6 289 32.5
Aqoxy7G02256 Aquilegia oxysepala HOM05D006756 ORTHO05D001869 2.8e-19 100.5 337 27.3
Glyma.06G217700 Glycine max HOM05D006756 ORTHO05D001869 2.8e-19 100.5 123 44.7
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 3.6e-19 100.1 532 28.0
AUR62013339 Chenopodium quinoa HOM05D006756 ORTHO05D001869 6.2e-19 99.4 121 41.3
Solyc07g008190.4 Solanum lycopersicum HOM05D006756 ORTHO05D001869 2.4e-18 97.4 486 26.5
Sopen07g004070 Solanum pennellii HOM05D006756 ORTHO05D001869 6.9e-18 95.9 490 26.7
Ah.09g225260 Amaranthus hybridus HOM05D006756 ORTHO05D001869 2.6e-17 94.0 410 29.0
FAN26G0517 Fragaria x ananassa HOM05D006756 ORTHO05D001869 5.8e-17 92.8 460 30.2
HanXRQChr05g0140241 Helianthus annuus HOM05D006756 ORTHO05D001869 5.8e-17 92.8 185 37.3
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 5.8e-17 92.8 488 26.0
SalBow1G7291 Salvia bowleyana HOM05D006756 ORTHO05D001869 9.9e-17 92.0 426 26.1
FAN28G3026 Fragaria x ananassa HOM05D006756 ORTHO05D001869 2.9e-16 90.5 454 29.3
EL10Ac8g18682 Beta vulgaris HOM05D006756 ORTHO05D001869 4.9e-16 89.7 121 38.8
Nitab4.5_0006268g0010 Nicotiana tabacum HOM05D006756 ORTHO05D001869 6.4e-16 89.4 525 26.9
FAN23G1563 Fragaria x ananassa HOM05D006756 ORTHO05D001869 1.6e-14 84.7 444 29.7
CAN.G573.9 Capsicum annuum HOM05D006756 ORTHO05D001869 1.0e-13 82.0 491 26.1
DCAR_017806 Daucus carota HOM05D006756 ORTHO05D001869 1.0e-13 82.0 117 41.0
Nitab4.5_0000028g0240 Nicotiana tabacum HOM05D006756 ORTHO05D001869 1.6e-11 74.7 90 45.6
unitig_748.g7157 Utricularia gibba HOM05D006756 ORTHO05D001869 1.1e-10 72.0 460 25.9
PSO017G1072 Papaver somniferum HOM05D006756 ORTHO05D001869 1.5e-09 68.2 454 25.8
ATR1120G177 Amborella trichopoda HOM05D006756 ORTHO05D001869 2.2e-08 64.3 120 37.5


User provided reference genes

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