Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D04G093048 Gossypium hirsutum HOM05D000003 ORTHO05D000007 1.5e-65 252.7 126 100.0
Gorai.009G395100 Gossypium raimondii HOM05D000003 ORTHO05D000007 8.0e-59 230.3 126 92.9
Gorai.013G140300 Gossypium raimondii HOM05D000003 ORTHO05D000007 1.1e-20 103.6 106 50.0
Gorai.007G183500 Gossypium raimondii HOM05D000003 ORTHO05D000007 1.2e-17 93.6 126 39.7
Gohir.D11G171250 Gossypium hirsutum HOM05D000003 ORTHO05D000007 2.2e-16 89.4 76 55.3
Gohir.D07G124050 Gossypium hirsutum HOM05D039549 ORTHO05D020798 4.6e-14 81.6 139 37.4
Gorai.003G132500 Gossypium raimondii HOM05D000003 ORTHO05D000007 1.5e-12 76.6 177 30.5
Ciclev10013460m.g Citrus clementina HOM05D000003 ORTHO05D000007 2.5e-12 75.9 164 29.3
Gorai.010G155700 Gossypium raimondii HOM05D015435 ORTHO05D000007 4.8e-11 71.6 137 32.8
TWI56G1353 Tripterygium wilfordii HOM05D000003 ORTHO05D000007 8.1e-11 70.9 113 35.4
Gorai.012G033400 Gossypium raimondii HOM05D015435 ORTHO05D000007 1.8e-10 69.7 136 33.8
Gorai.N011700 Gossypium raimondii HOM05D000003 ORTHO05D000007 3.1e-10 68.9 183 30.1
Gorai.007G282400 Gossypium raimondii HOM05D035969 ORTHO05D000007 1.2e-09 67.0 83 36.1
Cpa.g.sc4.197 Carica papaya HOM05D000003 ORTHO05D000007 1.5e-09 66.6 155 30.3
Gorai.009G414700 Gossypium raimondii HOM05D000003 ORTHO05D000007 3.4e-09 65.5 93 37.6
QL10p063003 Quercus lobata HOM05D000003 ORTHO05D000007 3.4e-09 65.5 103 36.9
QL11p001943 Quercus lobata HOM05D000003 ORTHO05D000007 1.3e-08 63.5 152 28.3
Sabra08G0135000 Salix brachista HOM05D000003 ORTHO05D000007 4.9e-08 61.6 137 28.5
Gorai.005G048700 Gossypium raimondii HOM05D000003 ORTHO05D000007 6.4e-08 61.2 168 26.8
Lj4g0003656 Lotus japonicus HOM05D000003 ORTHO05D000007 6.4e-08 61.2 186 25.8
Lj2g0007178 Lotus japonicus HOM05D000003 ORTHO05D000007 8.4e-08 60.8 104 32.7
Lj4g0016016 Lotus japonicus HOM05D000003 ORTHO05D000007 8.4e-08 60.8 104 29.8
PSO339G4387 Papaver somniferum HOM05D000003 ORTHO05D000007 1.1e-07 60.5 119 28.6
PSO541G5827 Papaver somniferum HOM05D000003 ORTHO05D000007 1.1e-07 60.5 119 27.7
QL12p006495 Quercus lobata HOM05D000003 ORTHO05D000007 1.1e-07 60.5 180 24.4
Dinv30689 Davidia involucrata HOM05D000003 ORTHO05D000007 1.4e-07 60.1 89 36.0
Prupe.2G044900 Prunus persica HOM05D000003 ORTHO05D000007 1.4e-07 60.1 133 25.6
QL08p054104 Quercus lobata HOM05D000003 ORTHO05D000007 1.4e-07 60.1 118 30.5
Rhsim09G0202100 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.9e-07 59.7 179 21.8
QL08p058815 Quercus lobata HOM05D000003 ORTHO05D000007 2.4e-07 59.3 142 29.6
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 3.2e-07 58.9 119 33.6
QL05p046120 Quercus lobata HOM05D000003 ORTHO05D000007 4.2e-07 58.5 154 24.7
Atru.chr11.84 Acer truncatum HOM05D000003 ORTHO05D000007 5.5e-07 58.2 115 28.7
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 5.5e-07 58.2 111 30.6
Gorai.001G139500 Gossypium raimondii HOM05D000003 ORTHO05D000007 5.5e-07 58.2 134 31.3
QL02p099277 Quercus lobata HOM05D000003 ORTHO05D000007 5.5e-07 58.2 109 32.1
Gorai.011G227300 Gossypium raimondii HOM05D000003 ORTHO05D000007 7.1e-07 57.8 99 35.4
PGR142G4317 Punica granatum HOM05D000003 ORTHO05D000007 7.1e-07 57.8 113 28.3
COL.COLO4_28682 Corchorus olitorius HOM05D000003 ORTHO05D000007 9.3e-07 57.4 121 29.8
Lj5g0001706 Lotus japonicus HOM05D000003 ORTHO05D000007 9.3e-07 57.4 102 33.3
Prupe.2G097600 Prunus persica HOM05D000003 ORTHO05D000007 9.3e-07 57.4 158 24.7
QL03p025414 Quercus lobata HOM05D000003 ORTHO05D000007 9.3e-07 57.4 119 31.1
QL02p068766 Quercus lobata HOM05D000003 ORTHO05D000007 1.2e-06 57.0 118 29.7
Atru.chr12.2519 Acer truncatum HOM05D000003 ORTHO05D000007 1.6e-06 56.6 117 28.2
Gorai.012G084700 Gossypium raimondii HOM05D000003 ORTHO05D000007 1.6e-06 56.6 68 36.8
PSO832G0039 Papaver somniferum HOM05D000003 ORTHO05D000007 1.6e-06 56.6 119 25.2
THA.LOC104799464 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 1.6e-06 56.6 176 25.6
Atru.chr4.106 Acer truncatum HOM05D000003 ORTHO05D000007 2.1e-06 56.2 117 29.1
Atru.chr6.753 Acer truncatum HOM05D000003 ORTHO05D000007 2.1e-06 56.2 93 32.3
Gohir.D09G106350 Gossypium hirsutum HOM05D000003 ORTHO05D000007 2.1e-06 56.2 48 58.3
Gorai.010G180600 Gossypium raimondii HOM05D000003 ORTHO05D000007 2.1e-06 56.2 96 32.3
QL02p083425 Quercus lobata HOM05D000003 ORTHO05D000007 2.1e-06 56.2 180 25.0
Gorai.005G084200 Gossypium raimondii HOM05D000003 ORTHO05D000007 2.7e-06 55.8 164 25.6
Gorai.010G075700 Gossypium raimondii HOM05D000003 ORTHO05D000007 2.7e-06 55.8 150 30.0
Lj2g0006651 Lotus japonicus HOM05D000003 ORTHO05D000007 2.7e-06 55.8 110 30.9
Lj3g0023340 Lotus japonicus HOM05D000003 ORTHO05D000007 2.7e-06 55.8 104 30.8
Lj4g0026510 Lotus japonicus HOM05D000003 ORTHO05D000007 2.7e-06 55.8 104 30.8
QL01p027762 Quercus lobata HOM05D000003 ORTHO05D000006 2.7e-06 55.8 118 28.0
QL01p027824 Quercus lobata HOM05D000003 ORTHO05D000006 2.7e-06 55.8 118 28.0
Atru.chr11.754 Acer truncatum HOM05D000003 ORTHO05D000007 3.5e-06 55.5 96 31.2
Cpa.g.sc281.5 Carica papaya HOM05D009428 ORTHO05D000007 3.5e-06 55.5 109 28.4
Gorai.003G070900 Gossypium raimondii HOM05D000003 ORTHO05D000007 3.5e-06 55.5 172 25.6
Lj4g0010109 Lotus japonicus HOM05D000003 ORTHO05D000007 3.5e-06 55.5 102 32.4
QL02p014176 Quercus lobata HOM05D000003 ORTHO05D000007 3.5e-06 55.5 177 25.4
PSO017G4416 Papaver somniferum HOM05D000003 ORTHO05D000007 4.6e-06 55.1 119 25.2
RcHm_v2.0_Chr2g0146151 Rosa chinensis HOM05D000003 ORTHO05D000006 4.6e-06 55.1 117 29.1
TPR.G24275 Trifolium pratense HOM05D000003 ORTHO05D000007 4.6e-06 55.1 176 24.4
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-06 54.7 117 29.1
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-06 54.7 117 27.4
Lj6g0027241 Lotus japonicus HOM05D000473 ORTHO05D000007 6.0e-06 54.7 103 33.0
QL03p025122 Quercus lobata HOM05D000003 ORTHO05D000007 6.0e-06 54.7 180 26.1
Cpa.g.sc16.67 Carica papaya HOM05D000003 ORTHO05D000007 7.9e-06 54.3 109 30.3
Gorai.004G145600 Gossypium raimondii HOM05D000003 ORTHO05D000007 7.9e-06 54.3 71 35.2
Gorai.008G030200 Gossypium raimondii HOM05D000003 ORTHO05D000007 7.9e-06 54.3 81 37.0
Gorai.011G227900 Gossypium raimondii HOM05D000003 ORTHO05D000007 7.9e-06 54.3 103 30.1
Lj2g0019281 Lotus japonicus HOM05D000003 ORTHO05D000007 7.9e-06 54.3 164 24.4
PSO017G5897 Papaver somniferum HOM05D000003 ORTHO05D000007 7.9e-06 54.3 119 28.6
QL01p003323 Quercus lobata HOM05D002710 ORTHO05D002905 7.9e-06 54.3 180 23.9


User provided reference genes

Program Settings