Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.2e-175 619.8 316 100.0
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 3.4e-175 618.2 315 99.7
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.3e-174 616.3 315 99.0
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.4e-152 543.1 319 86.5
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 1.5e-151 539.7 317 87.1
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.4e-144 516.5 315 81.9
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.7e-129 466.5 320 75.0
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.7e-129 466.5 323 73.4
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 4.8e-129 464.9 321 74.5
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 2.4e-128 462.6 317 76.0
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 3.1e-128 462.2 316 75.9
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.3e-126 456.8 319 73.0
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.3e-126 456.8 319 73.0
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 5.0e-126 454.9 329 72.6
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 1.1e-125 453.8 321 72.9
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 2.1e-124 449.5 320 73.1
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.4e-123 446.8 322 72.0
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.2e-122 443.7 320 71.9
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 1.2e-122 443.7 331 70.1
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 1.5e-122 443.4 261 83.5
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.5e-122 443.4 318 72.6
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.4e-122 441.8 327 71.9
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 5.7e-122 441.4 320 71.2
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 7.5e-122 441.0 324 71.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 9.8e-122 440.7 324 71.6
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-121 440.3 318 70.8
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.2e-121 439.5 320 71.2
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 8.3e-121 437.6 321 71.0
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.1e-120 437.2 324 70.7
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.1e-120 437.2 319 70.8
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 2.0e-119 433.0 320 71.2
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 3.5e-119 432.2 317 71.3
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.5e-119 432.2 320 70.6
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 4.5e-119 431.8 278 77.0
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.0e-118 430.6 320 70.3
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.3e-118 430.3 320 69.4
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.3e-118 430.3 323 69.7
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.3e-118 429.5 319 70.2
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 6.6e-118 427.9 319 69.3
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 2.5e-117 426.0 316 70.6
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 3.3e-117 425.6 293 74.7
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 3.3e-117 425.6 327 69.4
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 3.3e-117 425.6 324 68.5
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.6e-117 424.9 324 70.1
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.3e-117 424.5 324 70.4
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.2e-116 423.7 330 68.5
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.2e-116 423.7 319 69.3
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 1.2e-116 423.7 327 69.1
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.8e-116 422.5 320 70.6
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 4.7e-116 421.8 319 70.8
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 8.0e-116 421.0 255 81.6
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 8.0e-116 421.0 255 81.6
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 8.0e-116 421.0 319 68.7
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 8.0e-116 421.0 316 69.0
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.0e-115 420.6 317 68.5
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.4e-115 420.2 319 68.3
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.8e-115 419.9 323 69.0
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.8e-115 419.9 320 68.8
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 8.9e-115 417.5 288 72.6
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 3.4e-114 415.6 320 67.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.4e-114 415.6 304 72.0
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 7.5e-114 414.5 320 65.9
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 3.7e-113 412.1 319 68.0
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 3.7e-113 412.1 319 67.7
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 8.3e-113 411.0 316 68.7
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.9e-112 409.8 235 83.0
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 2.4e-112 409.5 315 66.7
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 7.0e-112 407.9 312 69.2
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 1.2e-111 407.1 316 69.0
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 1.2e-111 407.1 316 67.4
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.2e-111 407.1 395 58.0
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.0e-111 406.4 324 67.9
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 2.7e-111 406.0 315 66.7
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 4.6e-111 405.2 371 60.4
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 4.6e-111 405.2 237 82.3
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 6.0e-111 404.8 235 82.1
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 1.7e-110 403.3 315 67.6
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 2.3e-110 402.9 256 77.0
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 3.0e-110 402.5 324 66.0
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 5.0e-110 401.7 318 68.2
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 5.0e-110 401.7 320 67.2
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 5.0e-110 401.7 320 67.2
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 5.0e-110 401.7 318 68.2
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 6.6e-110 401.4 235 82.1
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 1.1e-109 400.6 315 66.7
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.5e-109 400.2 316 68.0
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 3.3e-109 399.1 321 66.7
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 5.6e-109 398.3 318 66.4
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 7.3e-109 397.9 257 75.1
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 9.5e-109 397.5 303 70.0
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.2e-108 397.1 288 70.1
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 3.6e-108 395.6 235 80.4
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 4.7e-108 395.2 302 69.5
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 4.7e-108 395.2 300 68.7
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 5.2e-107 391.7 328 65.2
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 9.8e-106 387.5 286 69.6
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 9.8e-106 387.5 257 73.5
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 4.9e-105 385.2 244 76.2
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 1.4e-104 383.6 315 64.8
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 3.2e-104 382.5 318 65.1
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 3.0e-102 375.9 305 65.6
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 1.1e-101 374.0 315 62.2
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 2.1e-100 369.8 299 65.2
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 2.0e-98 363.2 307 61.6
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 4.4e-98 362.1 235 74.5
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 1.2e-95 354.0 255 69.8
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 6.6e-94 348.2 335 59.7
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 3.6e-92 342.4 321 58.9
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 8.7e-86 321.2 271 58.7
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 1.4e-83 313.9 234 70.1
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 6.4e-81 305.1 316 57.0
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 4.0e-75 285.8 322 54.3
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 9.9e-74 281.2 303 53.8
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 8.4e-65 251.5 207 66.7
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.9e-62 242.7 208 64.4
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 5.1e-62 242.3 208 64.9
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 1.7e-57 227.3 203 60.1
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 9.3e-56 221.5 248 48.0
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 3.5e-55 219.5 207 58.5
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 3.5e-55 219.5 136 75.7
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 1.8e-54 217.2 224 50.9
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 1.1e-53 214.5 303 41.9
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 4.1e-51 206.1 110 90.9
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 6.9e-51 205.3 244 43.4
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 5.0e-49 199.1 109 87.2
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 5.5e-48 195.7 162 64.8
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.5e-48 195.7 111 86.5
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.5e-48 195.7 111 86.5
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 2.3e-46 190.3 300 39.7
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 2.9e-41 173.3 224 40.6
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 3.3e-37 159.8 231 39.8
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 5.3e-35 152.5 105 69.5
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 6.7e-30 135.6 134 59.0
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 6.7e-30 135.6 76 86.8
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 2.4e-27 127.1 108 67.6
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 5.3e-27 125.9 203 36.9
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 2.6e-26 123.6 94 69.1
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 4.2e-24 116.3 65 84.6
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.6e-23 114.4 65 83.1
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 3.6e-23 113.2 65 83.1
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 2.0e-21 107.5 99 61.6
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 2.0e-21 107.5 99 61.6
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 3.4e-21 106.7 95 63.2
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.1e-19 101.7 68 73.5
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 6.5e-17 92.4 50 86.0
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 8.5e-17 92.0 154 37.7
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 2.5e-16 90.5 84 64.3
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 2.5e-16 90.5 60 73.3
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 3.2e-16 90.1 52 82.7
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 8.8e-14 82.0 47 83.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.5e-13 81.3 160 38.1
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.7e-09 67.8 46 69.6
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 1.6e-07 61.2 59 59.3


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