Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 2.6e-30 134.8 71 100.0
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 1.3e-26 122.5 67 97.0
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 1.3e-26 122.5 67 97.0
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 1.3e-26 122.5 67 97.0
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 1.3e-26 122.5 67 97.0
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 1.3e-26 122.5 67 97.0
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 1.3e-26 122.5 67 97.0
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 1.3e-26 122.5 67 97.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 1.4e-23 112.5 67 91.0
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 1.4e-23 112.5 67 91.0
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 1.4e-23 112.5 67 91.0
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.4e-23 112.5 67 91.0
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 2.3e-23 111.7 67 88.1
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 3.1e-23 111.3 67 89.6
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 3.1e-23 111.3 67 89.6
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 4.0e-23 110.9 66 90.9
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 6.8e-23 110.2 67 88.1
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 6.8e-23 110.2 67 88.1
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 6.8e-23 110.2 67 88.1
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 8.9e-23 109.8 67 89.6
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.2e-22 109.4 67 86.6
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 1.5e-22 109.0 67 88.1
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 2.0e-22 108.6 67 86.6
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 2.0e-22 108.6 67 86.6
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 2.0e-22 108.6 67 86.6
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 2.0e-22 108.6 67 86.6
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 2.0e-22 108.6 67 89.6
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.6e-22 108.2 67 88.1
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 2.9e-21 104.8 67 86.6
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 3.7e-21 104.4 56 96.4
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 3.7e-21 104.4 65 84.6
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 4.9e-21 104.0 67 86.6
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 6.4e-21 103.6 67 85.1
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 8.3e-21 103.2 67 83.6
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 1.4e-20 102.4 67 82.1
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 4.1e-20 100.9 67 85.1
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 4.1e-20 100.9 67 85.1
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 2.7e-19 98.2 62 87.1
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 3.5e-19 97.8 67 85.1
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 6.0e-19 97.1 63 82.5
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 7.8e-19 96.7 67 80.6
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.3e-17 91.3 59 83.1
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 1.4e-15 85.9 50 88.0
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.4e-15 85.9 55 81.8
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 1.4e-15 85.9 67 73.1
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 1.7e-13 79.0 48 81.2
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 2.9e-13 78.2 67 70.1
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 1.2e-08 62.8 37 86.5
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 4.7e-08 60.8 35 91.4
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 7.6e-06 53.5 46 63.0


User provided reference genes

Program Settings