Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A13G080300 Gossypium hirsutum HOM05D034412 ORTHO05D003249 8.2e-130 467.6 347 100.0
Gorai.013G091700 Gossypium raimondii HOM05D034412 ORTHO05D003249 4.7e-117 425.2 349 90.0
Gohir.D13G080100 Gossypium hirsutum HOM05D034412 ORTHO05D003249 1.4e-116 423.7 349 89.4
COL.COLO4_27923 Corchorus olitorius HOM05D002953 ORTHO05D003249 2.4e-36 157.1 323 44.0
Thecc.02G335300 Theobroma cacao HOM05D002953 ORTHO05D003249 1.1e-28 131.7 311 42.1
Dinv16709 Davidia involucrata HOM05D002953 ORTHO05D003249 7.2e-25 119.0 257 37.4
Gohir.A03G103200 Gossypium hirsutum HOM05D002953 ORTHO05D003249 9.4e-25 118.6 303 41.3
Gorai.005G144100 Gossypium raimondii HOM05D002953 ORTHO05D003249 2.1e-24 117.5 303 41.3
Atru.chr11.1683 Acer truncatum HOM05D002953 ORTHO05D003249 2.7e-24 117.1 353 32.6
Gohir.D02G128400 Gossypium hirsutum HOM05D002953 ORTHO05D003249 2.7e-24 117.1 303 41.3
QL03p071046 Quercus lobata HOM05D002953 ORTHO05D003249 2.8e-21 107.1 351 28.5
Actinidia19918 Actinidia chinensis HOM05D002953 ORTHO05D003249 6.3e-21 105.9 353 29.7
Potri.010G160900 Populus trichocarpa HOM05D002953 ORTHO05D003249 2.4e-20 104.0 355 30.7
FAN07G2390 Fragaria x ananassa HOM05D000954 ORTHO05D000822 1.5e-19 101.3 363 29.8
TAR371G0440 Trochodendron aralioides HOM05D002953 ORTHO05D003249 2.6e-19 100.5 268 35.4
TAR622G0728 Trochodendron aralioides HOM05D002953 ORTHO05D003249 7.7e-19 99.0 350 29.4
Haze_11930 Corylus avellana HOM05D002953 ORTHO05D003249 1.0e-18 98.6 353 32.9
Prupe.1G282700 Prunus persica HOM05D002953 ORTHO05D003249 2.9e-18 97.1 191 42.9
RcHm_v2.0_Chr4g0438751 Rosa chinensis HOM05D002953 ORTHO05D003249 5.0e-18 96.3 167 43.1
FvH4_4g30432 Fragaria vesca HOM05D002953 ORTHO05D003249 7.2e-17 92.4 267 32.6
Ciclev10033969m.g Citrus clementina HOM05D002953 ORTHO05D003249 2.7e-16 90.5 379 31.1
FAN12G1055 Fragaria x ananassa HOM05D002953 ORTHO05D003249 6.7e-15 85.9 267 32.6
CiPaw.05G127400 Carya illinoinensis HOM05D002953 ORTHO05D003249 3.3e-14 83.6 258 32.6
Rhsim12G0076400 Rhododendron simsii HOM05D002953 ORTHO05D003249 7.4e-14 82.4 376 34.6
GSVIVG01012183001 Vitis vinifera HOM05D002953 ORTHO05D003249 9.7e-14 82.0 147 38.8
Hma1.2p1_0357F.1_g134470 Hydrangea macrophylla HOM05D002953 ORTHO05D003249 1.7e-13 81.3 187 35.8
Aqoxy3G00465 Aquilegia oxysepala HOM05D002953 ORTHO05D003249 4.8e-13 79.7 176 37.5
FAN22G1160 Fragaria x ananassa HOM05D000954 ORTHO05D003249 6.3e-13 79.3 344 27.9
PSO017G2547 Papaver somniferum HOM05D002953 ORTHO05D003249 6.3e-13 79.3 181 37.6
PSO478G1910 Papaver somniferum HOM05D002953 ORTHO05D003249 6.3e-13 79.3 181 38.1
Sabra10G0122400 Salix brachista HOM05D002953 ORTHO05D003249 3.1e-12 77.0 351 27.6
CANSAT64G0943 Cannabis sativa HOM05D002953 ORTHO05D003249 1.2e-11 75.1 361 25.5
Potri.008G093300 Populus trichocarpa HOM05D002953 ORTHO05D003249 1.5e-11 74.7 374 25.4
Nn4g23349 Nelumbo nucifera HOM05D002953 ORTHO05D003249 7.7e-11 72.4 189 32.3
PGR102G2110 Punica granatum HOM05D002953 ORTHO05D003249 7.7e-11 72.4 362 29.6
DCAR_007182 Daucus carota HOM05D002953 ORTHO05D003249 8.5e-10 68.9 350 41.1
Lalb_Chr17g0341061 Lupinus albus HOM05D002953 ORTHO05D003249 2.5e-09 67.4 350 28.6
CSS0004001 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 5.5e-09 66.2 135 38.5
Nn3g17381 Nelumbo nucifera HOM05D002953 ORTHO05D003249 7.2e-09 65.9 351 25.4
CiPaw.06G090600 Carya illinoinensis HOM05D002953 ORTHO05D003249 9.4e-09 65.5 309 35.6
Cc11_g12310 Coffea canephora HOM05D002953 ORTHO05D003249 2.7e-08 63.9 268 26.9
Nitab4.5_0000014g0320 Nicotiana tabacum HOM05D002953 ORTHO05D003249 2.7e-08 63.9 349 25.2
Carub.0001s1362 Capsella rubella HOM05D002953 ORTHO05D003249 3.6e-08 63.5 145 35.2
CAN.G1340.5 Capsicum annuum HOM05D002953 ORTHO05D003249 8.0e-08 62.4 169 34.9
Lj4g0014446 Lotus japonicus HOM05D002953 ORTHO05D003249 1.8e-07 61.2 189 33.9
Medtr4g082910 Medicago truncatula HOM05D002953 ORTHO05D003249 3.0e-07 60.5 360 26.4
SalBow2G1905 Salvia bowleyana HOM05D002953 ORTHO05D003249 4.0e-07 60.1 368 34.0
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 8.8e-07 58.9 193 31.1
MD13G1065400 Malus domestica HOM05D002953 ORTHO05D003249 8.8e-07 58.9 283 23.7
Psat2g127880 Pisum sativum HOM05D002953 ORTHO05D003249 8.8e-07 58.9 206 31.6
SalBow2G2783 Salvia bowleyana HOM05D002953 ORTHO05D003249 8.8e-07 58.9 368 33.7
Phvul.002G068600 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 2.0e-06 57.8 191 31.9
VMungo1215G1853 Vigna mungo HOM05D002953 ORTHO05D003249 4.4e-06 56.6 348 25.0
Lalb_Chr16g0385611 Lupinus albus HOM05D002953 ORTHO05D003249 5.7e-06 56.2 364 41.8
Sopen05g007380 Solanum pennellii HOM05D002953 ORTHO05D003249 5.7e-06 56.2 162 35.2
TWI75G0656 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 7.5e-06 55.8 329 25.8
Lj6C782G17 Lonicera japonica HOM05D002953 ORTHO05D003249 9.7e-06 55.5 316 37.0


User provided reference genes

Program Settings