Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A13G009600 Gossypium hirsutum HOM05D010745 ORTHO05D013866 3.8e-91 338.2 176 100.0
Gohir.D13G010300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 7.9e-89 330.5 176 97.2
Gorai.013G011000 Gossypium raimondii HOM05D010745 ORTHO05D013866 7.9e-89 330.5 176 97.2
Gohir.D13G010250 Gossypium hirsutum HOM05D010745 ORTHO05D013866 5.3e-85 317.8 170 96.5
Gohir.A13G009650 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.1e-58 230.3 185 67.6
Gohir.D13G010450 Gossypium hirsutum HOM05D010745 ORTHO05D013866 4.0e-56 221.9 174 67.2
Gorai.013G011100 Gossypium raimondii HOM05D010745 ORTHO05D013866 6.8e-56 221.1 174 67.2
Gohir.A13G009750 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.8e-53 213.0 172 65.7
Gohir.A05G299300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.2e-52 210.3 166 68.7
Gorai.013G011400 Gossypium raimondii HOM05D010745 ORTHO05D013866 4.4e-47 191.8 172 62.2
Gohir.D13G010666 Gossypium hirsutum HOM05D010745 ORTHO05D013866 7.5e-47 191.0 172 62.2
Gorai.013G011300 Gossypium raimondii HOM05D010745 ORTHO05D013866 3.5e-28 129.0 119 58.0
Gohir.D13G010633 Gossypium hirsutum HOM05D010745 ORTHO05D013866 7.8e-28 127.9 123 57.7
Thecc.10G115400 Theobroma cacao HOM05D010745 ORTHO05D013866 1.2e-20 104.0 171 44.4
Glyma.20G008100 Glycine max HOM05D001667 ORTHO05D001508 5.6e-10 68.6 140 37.1
MBI17_g16778_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 2.4e-08 63.2 104 38.5
arahy.Tifrunner.gnm1.ann1.8QQ9KG Arachis hypogaea HOM05D001667 ORTHO05D001508 5.3e-08 62.0 110 40.9
arahy.Tifrunner.gnm1.ann1.DY9K7Z Arachis hypogaea HOM05D001667 ORTHO05D001508 5.3e-08 62.0 110 40.9
Ca_11725_v3 Cicer arietinum L. HOM05D001667 ORTHO05D001508 5.3e-08 62.0 104 37.5
Dinv22798 Davidia involucrata HOM05D001667 ORTHO05D001508 6.9e-08 61.6 103 39.8
ClCG08G008390 Citrullus lanatus HOM05D001667 ORTHO05D001508 9.0e-08 61.2 151 27.8
Dinv08595 Davidia involucrata HOM05D010745 ORTHO05D013866 1.2e-07 60.8 172 31.4
Sabra10G0188900 Salix brachista HOM05D001667 ORTHO05D001508 1.5e-07 60.5 116 34.5
Phvul.007G024000 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 2.0e-07 60.1 108 38.0
HanXRQChr02g0053821 Helianthus annuus HOM05D001667 ORTHO05D001508 2.6e-07 59.7 120 33.3
TPR.G8730 Trifolium pratense HOM05D001667 ORTHO05D001508 4.5e-07 58.9 109 39.4
TAR623G1308 Trochodendron aralioides HOM05D001667 ORTHO05D001508 4.5e-07 58.9 115 35.7
Dinv31738 Davidia involucrata HOM05D001667 ORTHO05D001508 7.6e-07 58.2 114 35.1
FAN05G3938 Fragaria x ananassa HOM05D001667 ORTHO05D001508 7.6e-07 58.2 101 37.6
RcHm_v2.0_Chr3g0475171 Rosa chinensis HOM05D001667 ORTHO05D001508 7.6e-07 58.2 102 40.2
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 9.9e-07 57.8 121 34.7
Gohir.A09G097500 Gossypium hirsutum HOM05D001667 ORTHO05D001508 9.9e-07 57.8 111 33.3
Lsat_1_v5_gn_2_54800 Lactuca sativa HOM05D001667 ORTHO05D001508 9.9e-07 57.8 108 34.3
Manes.08G030700 Manihot esculenta HOM05D001667 ORTHO05D001508 9.9e-07 57.8 111 37.8
QL07p037582 Quercus lobata HOM05D001667 ORTHO05D001508 9.9e-07 57.8 101 39.6
THA.LOC104816609 Tarenaya hassleriana HOM05D001667 ORTHO05D001508 9.9e-07 57.8 106 36.8
THA.LOC104826812 Tarenaya hassleriana HOM05D001667 ORTHO05D001508 9.9e-07 57.8 106 37.7
TWI74G1322 Tripterygium wilfordii HOM05D001667 ORTHO05D001508 9.9e-07 57.8 102 39.2
Dinv08596 Davidia involucrata HOM05D010745 ORTHO05D001508 1.3e-06 57.4 124 31.5
ECA238G0917 Erigeron canadensis HOM05D001667 ORTHO05D001508 1.3e-06 57.4 111 32.4
QL04p047013 Quercus lobata HOM05D001667 ORTHO05D001508 1.3e-06 57.4 139 30.2
ClCG04G010320 Citrullus lanatus HOM05D001667 ORTHO05D001508 1.7e-06 57.0 102 36.3
CsaV3_6G040940 Cucumis sativus L. HOM05D001667 ORTHO05D001508 1.7e-06 57.0 104 37.5
Duzib128G0359 Durio zibethinus HOM05D001667 ORTHO05D001508 1.7e-06 57.0 100 37.0
Eucgr.A02613 Eucalyptus grandis HOM05D001667 ORTHO05D001508 1.7e-06 57.0 104 40.4
Duzib106G0445 Durio zibethinus HOM05D001667 ORTHO05D001508 2.2e-06 56.6 100 37.0
FvH4_6g19800 Fragaria vesca HOM05D001667 ORTHO05D001508 2.2e-06 56.6 102 39.2
FAN02G0800 Fragaria x ananassa HOM05D001667 ORTHO05D001508 2.2e-06 56.6 102 39.2
FAN05G2851 Fragaria x ananassa HOM05D001667 ORTHO05D001508 2.2e-06 56.6 102 39.2
Nn6g34775 Nelumbo nucifera HOM05D001667 ORTHO05D001508 2.2e-06 56.6 107 38.3
MSTRG.19292 Avicennia marina HOM05D001667 ORTHO05D001508 2.9e-06 56.2 103 36.9
MSTRG.5878 Avicennia marina HOM05D001667 ORTHO05D001508 2.9e-06 56.2 106 34.9
FAN14G5362 Fragaria x ananassa HOM05D001667 ORTHO05D001508 2.9e-06 56.2 102 39.2
PSO801G0813 Papaver somniferum HOM05D001667 ORTHO05D001508 2.9e-06 56.2 112 30.4
Sabra06G0158900 Salix brachista HOM05D001667 ORTHO05D001508 2.9e-06 56.2 98 36.7
HanXRQChr05g0130531 Helianthus annuus HOM05D001667 ORTHO05D001508 3.8e-06 55.8 109 34.9
AUR62028513 Chenopodium quinoa HOM05D001667 ORTHO05D001508 4.9e-06 55.5 129 31.0
Gohir.A07G111600 Gossypium hirsutum HOM05D001667 ORTHO05D001508 4.9e-06 55.5 103 32.0
Medtr1g058120 Medicago truncatula HOM05D001667 ORTHO05D001508 4.9e-06 55.5 112 36.6
Oeu009316.1 Olea europaea HOM05D001667 ORTHO05D001508 4.9e-06 55.5 100 35.0
Psat6g082040 Pisum sativum HOM05D001667 ORTHO05D001508 4.9e-06 55.5 109 35.8
CSS0036703 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 6.4e-06 55.1 115 30.4
CSS0040873 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 6.4e-06 55.1 115 30.4
MD14G1034000 Malus domestica HOM05D001667 ORTHO05D001508 6.4e-06 55.1 100 38.0
Manes.07G085401 Manihot esculenta HOM05D015231 ORTHO05D001508 6.4e-06 55.1 127 33.1
Nn2g14254 Nelumbo nucifera HOM05D001590 ORTHO05D001508 6.4e-06 55.1 130 32.3
Phvul.007G023900 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 6.4e-06 55.1 107 36.4
Potri.016G073400 Populus trichocarpa HOM05D001667 ORTHO05D001508 6.4e-06 55.1 98 35.7
CiPaw.09G018100 Carya illinoinensis HOM05D001667 ORTHO05D001508 8.4e-06 54.7 88 40.9
Ciclev10013147m.g Citrus clementina HOM05D001667 ORTHO05D001508 8.4e-06 54.7 100 37.0
MELO3C009512.2 Cucumis melo HOM05D001667 ORTHO05D001508 8.4e-06 54.7 103 35.0
Oeu017706.1 Olea europaea HOM05D001667 ORTHO05D001508 8.4e-06 54.7 100 34.0
Potri.006G206000 Populus trichocarpa HOM05D001667 ORTHO05D001508 8.4e-06 54.7 98 35.7


User provided reference genes

Program Settings