Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G229600 Gossypium hirsutum HOM05D008285 ORTHO05D010431 2.0e-22 108.2 55 100.0
Gohir.1Z049931 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.1e-20 102.4 55 94.5
Gohir.A02G134106 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.1e-20 102.4 55 94.5
Gorai.009G442800 Gossypium raimondii HOM05D008285 ORTHO05D010431 1.1e-20 102.4 55 94.5
Gohir.A01G140110 Gossypium hirsutum HOM05D008285 ORTHO05D010431 4.2e-20 100.5 55 92.7
Gohir.1Z049481 Gossypium hirsutum HOM05D008285 ORTHO05D010431 5.5e-20 100.1 55 92.7
Nn031s41612 Nelumbo nucifera HOM05D008285 ORTHO05D010431 3.0e-18 94.4 52 88.5
Nn064s42214 Nelumbo nucifera HOM05D008285 ORTHO05D010431 3.0e-18 94.4 52 88.5
PGR111G0120 Punica granatum HOM05D008285 ORTHO05D010431 5.1e-18 93.6 52 88.5
Hma1.2p1_0859F.1_g229500 Hydrangea macrophylla HOM05D008285 ORTHO05D010431 6.7e-18 93.2 52 88.5
CSS0043912 Camellia sinensis var. sinensis HOM05D008285 ORTHO05D010431 3.3e-17 90.9 52 86.5
Nn8g41105 Nelumbo nucifera HOM05D008285 ORTHO05D010431 3.3e-17 90.9 52 86.5
Nn212s45209 Nelumbo nucifera HOM05D008285 ORTHO05D010431 7.4e-17 89.7 53 86.8
PGSC0003DMG400000878 Solanum tuberosum HOM05D008285 ORTHO05D010431 9.6e-17 89.4 53 81.1
SalBow1G4672 Salvia bowleyana HOM05D008285 ORTHO05D010431 1.6e-16 88.6 52 84.6
SalBow1G6462 Salvia bowleyana HOM05D008285 ORTHO05D010431 1.6e-16 88.6 52 84.6
Manes.18G138300 Manihot esculenta HOM05D008285 ORTHO05D010431 4.8e-16 87.0 51 82.4
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.4e-15 85.5 50 82.0
Nn1g08636 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.4e-15 85.5 52 80.8
PSO548G0110 Papaver somniferum HOM05D008285 ORTHO05D010431 4.0e-15 84.0 52 80.8
RcHm_v2.0_CPg0502841 Rosa chinensis HOM05D008285 ORTHO05D010431 4.0e-15 84.0 47 85.1
ATCG01020 Arabidopsis thaliana HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
C09p40390 Brassica napus HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
BolSC29t60502H Brassica oleracea HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
BolSC35t60700H Brassica oleracea HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
BolSC44t60819H Brassica oleracea HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
BraSC103t45425Z Brassica rapa HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
BraSC138t45538Z Brassica rapa HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
BraSC25t45906Z Brassica rapa HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
BraSC59t46547Z Brassica rapa HOM05D008285 ORTHO05D010431 5.3e-15 83.6 50 80.0
DCAR_032534 Daucus carota HOM05D008285 ORTHO05D010431 9.0e-15 82.8 50 84.0
HanXRQCPg0580381 Helianthus annuus HOM05D008285 ORTHO05D010431 9.0e-15 82.8 52 80.8
RcHm_v2.0_Chr4g0421191 Rosa chinensis HOM05D008285 ORTHO05D010431 2.0e-14 81.6 47 83.0
BolC9t56809H Brassica oleracea HOM05D008285 ORTHO05D010431 2.6e-14 81.3 50 80.0
BolC9t56929H Brassica oleracea HOM05D008285 ORTHO05D010431 3.4e-14 80.9 50 76.0
C02p28770 Brassica napus HOM05D008285 ORTHO05D010431 4.5e-14 80.5 50 76.0
BolC2t08924H Brassica oleracea HOM05D008285 ORTHO05D010431 4.5e-14 80.5 50 76.0
CARHR282410 Cardamine hirsuta HOM05D008285 ORTHO05D010431 4.5e-14 80.5 50 80.0
Solyc03g013610.1 Solanum lycopersicum HOM05D008285 ORTHO05D010431 1.7e-13 78.6 53 75.5
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 2.2e-13 78.2 47 83.0
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 5.0e-13 77.0 47 80.9
CAN.G1045.12 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-12 75.9 47 76.6
CAN.G1045.15 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-12 75.9 47 76.6
CAN.G222.14 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-12 75.9 47 76.6
CAN.G413.8 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-12 75.9 47 76.6
CAN.G657.10 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-12 75.9 47 76.6
Nitab4.5_0015353g0010 Nicotiana tabacum HOM05D008285 ORTHO05D010431 2.5e-12 74.7 45 82.2
CAN.G1431.2 Capsicum annuum HOM05D008285 ORTHO05D010431 3.2e-12 74.3 47 74.5
BolC2t10592H Brassica oleracea HOM05D008285 ORTHO05D010431 4.2e-12 73.9 46 76.1
CAN.G965.8 Capsicum annuum HOM05D008285 ORTHO05D010431 5.5e-12 73.6 47 74.5
CAN.G1324.6 Capsicum annuum HOM05D008285 ORTHO05D010431 9.3e-12 72.8 47 74.5
SGA_v2.0_scaffold36G14477 Striga asiatica HOM05D008285 ORTHO05D010431 1.2e-11 72.4 46 80.4
CAN.G8.24 Capsicum annuum HOM05D008285 ORTHO05D010431 1.6e-11 72.0 47 72.3
Lalb_Chr07g0191721 Lupinus albus HOM05D008285 ORTHO05D010431 6.1e-11 70.1 49 73.5
CAN.G213.15 Capsicum annuum HOM05D008285 ORTHO05D010431 7.9e-11 69.7 47 70.2
Medtr4g006140 Medicago truncatula HOM05D008285 ORTHO05D010431 1.8e-10 68.6 44 75.0
BolSC45t60913H Brassica oleracea HOM05D008285 ORTHO05D010431 2.3e-10 68.2 49 75.5
Aqoxy1G03262 Aquilegia oxysepala HOM05D008285 ORTHO05D010431 5.1e-10 67.0 47 72.3
CAN.G262.5 Capsicum annuum HOM05D008285 ORTHO05D010431 5.1e-10 67.0 51 68.6
Psat5g142800 Pisum sativum HOM05D008285 ORTHO05D010431 6.7e-10 66.6 46 71.7
Potri.009G163200 Populus trichocarpa HOM05D008285 ORTHO05D010431 7.4e-09 63.2 54 63.0
Glyma.18G193100 Glycine max HOM05D008285 ORTHO05D010431 4.5e-06 53.9 51 52.9


User provided reference genes

Program Settings