Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.2e-188 662.1 333 100.0
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.0e-185 653.3 333 98.5
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.9e-185 651.7 333 98.2
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 6.4e-172 607.4 333 91.6
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.9e-171 605.9 333 91.3
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 5.1e-169 597.8 329 91.2
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 6.0e-162 574.3 331 87.3
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 4.3e-160 568.2 331 86.1
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 4.0e-158 561.6 333 84.1
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 8.4e-156 553.9 333 83.8
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 7.1e-155 550.8 331 83.7
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.3e-153 546.6 332 81.3
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.7e-153 546.2 333 81.7
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.5e-152 543.1 333 82.9
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.9e-152 542.7 333 81.4
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 7.3e-152 540.8 337 81.0
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 2.0e-149 532.7 333 80.8
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.8e-148 528.5 333 79.3
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.4e-147 526.6 333 80.2
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.4e-147 525.8 333 79.0
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.4e-147 525.8 333 80.5
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 4.2e-147 525.0 331 78.5
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.2e-146 523.5 333 79.3
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 4.6e-146 521.5 333 78.4
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.3e-145 519.2 333 79.3
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.3e-144 515.4 324 79.9
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 5.6e-144 514.6 331 78.5
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.3e-143 513.5 331 77.0
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.3e-143 513.5 333 78.7
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.6e-143 513.1 330 78.8
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 2.1e-143 512.7 333 78.1
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.1e-143 510.8 331 78.5
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 8.1e-143 510.8 333 77.8
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 8.1e-143 510.8 333 78.1
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.1e-142 510.4 333 77.2
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.1e-142 510.4 333 77.2
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.1e-142 510.4 331 76.7
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.8e-142 509.6 330 78.5
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 3.1e-142 508.8 333 78.7
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 6.9e-142 507.7 331 76.4
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 6.9e-142 507.7 333 77.2
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.0e-142 507.3 331 77.0
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.5e-141 506.5 331 77.9
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 1.5e-141 506.5 331 76.7
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 2.0e-141 506.1 333 76.3
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.4e-141 505.4 333 76.9
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 4.5e-141 505.0 333 78.4
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.8e-141 504.6 330 77.3
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.8e-141 504.6 330 77.3
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 7.6e-141 504.2 331 75.8
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.7e-140 503.1 331 76.1
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 2.9e-140 502.3 331 75.5
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 2.9e-140 502.3 333 77.8
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 3.8e-140 501.9 321 79.8
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 4.9e-140 501.5 331 75.5
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 6.4e-140 501.1 333 78.1
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 5.4e-139 498.0 331 75.8
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 9.3e-139 497.3 333 76.9
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.7e-138 495.7 331 75.8
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 4.6e-138 495.0 333 76.3
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 7.9e-138 494.2 333 74.5
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.0e-137 493.8 334 76.0
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 5.1e-137 491.5 331 74.3
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 8.7e-137 490.7 423 62.9
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.1e-136 490.3 357 71.1
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.3e-136 488.8 321 76.3
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.6e-136 487.3 321 76.6
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.6e-135 486.5 331 75.8
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 3.7e-135 485.3 333 74.5
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.8e-134 483.0 332 74.1
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 4.5e-133 478.4 335 74.3
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 4.5e-133 478.4 348 73.6
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 2.9e-132 475.7 338 72.2
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 5.5e-131 471.5 338 71.3
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 8.7e-129 464.2 280 84.6
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 4.3e-128 461.8 329 71.4
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.0e-126 455.3 325 72.6
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 4.9e-124 448.4 333 68.5
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.6e-122 443.4 333 67.9
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 1.3e-121 440.3 333 67.6
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 5.7e-120 434.9 327 68.5
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 4.8e-119 431.8 333 67.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 6.9e-118 427.9 335 66.6
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 7.7e-117 424.5 324 67.0
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 8.8e-113 411.0 326 67.5
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.3e-111 407.1 351 63.2
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 3.7e-111 405.6 369 60.4
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 3.7e-111 405.6 334 64.7
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 4.5e-109 398.7 352 62.2
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 3.8e-108 395.6 354 61.6
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 6.5e-108 394.8 343 63.6
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 5.5e-107 391.7 344 63.4
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 5.5e-107 391.7 344 63.4
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 7.2e-107 391.3 330 63.6
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.2e-106 390.6 343 63.6
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.9e-106 387.9 230 86.1
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.4e-105 387.1 272 72.8
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 3.0e-97 359.4 253 72.3
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 9.7e-96 354.4 253 71.9
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.4e-94 350.5 347 57.6
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 1.8e-94 350.1 343 58.0
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 1.8e-94 350.1 343 58.0
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 9.1e-94 347.8 342 58.2
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 9.1e-94 347.8 342 58.2
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 3.5e-93 345.9 335 57.9
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 2.2e-79 300.1 305 57.7
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 5.5e-75 285.4 202 70.8
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.6e-72 276.6 205 72.2
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 2.1e-66 256.9 161 80.1
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 1.4e-65 254.2 324 43.5
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.0e-56 223.8 139 82.0
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.3e-49 200.3 341 37.2
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 2.6e-48 196.8 340 37.1
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 5.4e-46 189.1 117 80.3
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 6.0e-45 185.7 161 64.0
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 6.6e-44 182.2 122 77.9
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 4.7e-42 176.0 152 61.2
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 2.7e-37 160.2 235 46.4
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.1e-30 138.3 303 36.0
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 7.1e-30 135.6 330 32.1
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 1.5e-27 127.9 196 40.3
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 1.9e-27 127.5 126 57.1
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 2.9e-23 113.6 78 71.8
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 4.2e-22 109.8 79 68.4
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 3.9e-20 103.2 83 61.4
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 9.0e-17 92.0 265 29.8
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.1e-11 75.1 48 75.0
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 2.4e-09 67.4 234 27.8
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 5.3e-09 66.2 270 25.9
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 9.0e-09 65.5 273 26.0
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.4e-08 63.5 268 24.6
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 4.5e-08 63.2 268 24.3
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 5.8e-08 62.8 288 25.0
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 2.9e-07 60.5 276 26.4
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 5.0e-07 59.7 332 23.5
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 6.5e-07 59.3 235 25.1
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.1e-06 58.5 375 23.2
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 1.1e-06 58.5 332 24.4
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.1e-06 58.5 304 25.7
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.9e-06 57.8 280 23.6
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 1.9e-06 57.8 294 23.5
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.9e-06 57.8 276 26.4
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 2.5e-06 57.4 235 25.1
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 2.5e-06 57.4 287 23.7
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 2.5e-06 57.4 289 25.6
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 3.2e-06 57.0 298 24.8
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 7.2e-06 55.8 273 24.9
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 7.2e-06 55.8 285 23.9
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 9.3e-06 55.5 245 26.9


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