Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 1.3e-162 576.2 281 100.0
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 4.7e-160 567.8 281 98.2
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 2.4e-156 555.4 282 96.8
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 1.9e-132 476.1 288 81.2
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 2.7e-131 472.2 281 80.8
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 1.4e-111 406.8 276 70.3
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 1.0e-106 390.6 276 69.2
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 4.3e-105 385.2 273 68.9
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 1.1e-103 380.6 275 68.0
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 9.1e-103 377.5 278 66.5
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 1.5e-102 376.7 278 66.5
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 7.7e-102 374.4 277 64.6
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 1.1e-100 370.5 278 64.7
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 2.5e-100 369.4 275 64.7
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 1.2e-99 367.1 277 66.1
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 1.2e-99 367.1 273 64.8
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 1.6e-99 366.7 271 65.7
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 8.8e-98 360.9 277 64.3
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 3.3e-97 359.0 280 62.9
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 3.3e-97 359.0 275 65.8
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 4.4e-97 358.6 277 62.1
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 8.2e-96 354.4 281 61.2
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 1.1e-95 354.0 227 71.8
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 1.4e-95 353.6 278 63.7
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 1.8e-95 353.2 278 62.6
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 1.2e-94 350.5 278 62.2
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 2.6e-94 349.4 281 60.9
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 5.9e-94 348.2 275 63.3
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 5.9e-94 348.2 277 61.4
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 1.7e-93 346.7 284 62.0
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 4.2e-92 342.0 278 61.5
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 7.2e-92 341.3 278 61.2
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 1.2e-91 340.5 276 58.7
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 1.2e-91 340.5 276 58.7
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 3.6e-91 339.0 277 64.3
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 4.7e-91 338.6 273 59.0
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 7.9e-91 337.8 274 58.4
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 1.0e-90 337.4 269 63.6
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 1.0e-90 337.4 274 60.9
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 2.3e-90 336.3 278 58.3
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 2.3e-90 336.3 373 49.9
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 3.0e-90 335.9 281 59.4
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 3.9e-90 335.5 275 58.9
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 8.8e-90 334.3 275 59.6
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 8.8e-90 334.3 276 62.3
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 1.1e-89 334.0 282 57.8
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 1.5e-89 333.6 278 60.4
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 2.6e-89 332.8 274 58.8
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 3.3e-89 332.4 272 59.2
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 3.3e-89 332.4 275 57.8
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 4.4e-89 332.0 272 59.2
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 7.4e-89 331.3 276 60.9
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 7.4e-89 331.3 275 59.3
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 2.2e-88 329.7 274 59.5
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 2.2e-88 329.7 272 58.1
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 1.1e-87 327.4 277 59.2
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 1.8e-87 326.6 275 57.8
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 2.4e-87 326.2 301 55.5
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 2.4e-87 326.2 275 57.8
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 2.4e-87 326.2 275 57.8
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 3.1e-87 325.9 274 57.3
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 7.0e-87 324.7 275 57.8
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 7.0e-87 324.7 275 57.5
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 1.2e-86 323.9 275 58.2
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 1.6e-86 323.6 266 59.8
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 7.7e-86 321.2 278 58.3
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 1.0e-85 320.9 275 57.1
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 1.0e-85 320.9 275 56.0
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 2.2e-85 319.7 275 57.1
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 5.0e-85 318.5 277 56.7
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 6.5e-85 318.2 275 57.5
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 2.5e-84 316.2 263 57.8
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 9.4e-84 314.3 278 56.5
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 9.4e-84 314.3 275 56.7
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 1.4e-82 310.5 278 56.5
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 2.3e-82 309.7 350 47.4
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 8.8e-82 307.8 278 55.0
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 2.6e-81 306.2 200 67.5
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 5.7e-81 305.1 246 62.2
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 4.5e-78 295.4 268 53.7
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 2.2e-77 293.1 275 53.1
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 8.0e-75 284.6 270 56.3
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 3.4e-73 279.3 321 50.8
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 1.1e-71 274.2 255 53.7
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 7.0e-71 271.6 498 34.9
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 6.5e-69 265.0 206 61.2
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 8.0e-67 258.1 278 49.6
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 1.2e-62 244.2 280 44.6
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 1.0e-58 231.1 217 56.2
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 1.8e-58 230.3 152 68.4
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 6.8e-58 228.4 186 61.8
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 8.3e-56 221.5 166 63.9
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 3.7e-48 196.1 231 42.0
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 1.1e-47 194.5 234 42.7
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 9.2e-47 191.4 273 39.6
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 4.6e-46 189.1 240 38.8
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 5.6e-44 182.2 189 50.3
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 1.1e-39 167.9 110 66.4
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 2.1e-35 153.7 196 43.9
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 4.0e-34 149.4 178 48.3
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 1.2e-33 147.9 144 48.6
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 2.9e-32 143.3 101 63.4
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 2.7e-22 110.2 142 46.5
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 1.7e-21 107.5 75 65.3
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 3.0e-21 106.7 85 55.3
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 3.6e-19 99.8 67 62.7
PRCOL_00004174 Prasinoderma coloniale HOM05D003201 ORTHO05D008914 3.4e-17 93.2 204 32.8
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 1.3e-16 91.3 68 55.9
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 1.4e-10 71.2 89 39.3
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 3.4e-09 66.6 41 65.9


User provided reference genes

Program Settings