Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.1e-195 683.7 337 100.0
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.8e-188 661.4 335 96.4
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.1e-187 659.8 335 96.1
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.1e-177 624.4 337 91.7
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.3e-176 621.3 337 91.1
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-173 613.2 337 90.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 3.9e-169 598.2 336 86.0
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.3e-164 583.2 348 83.3
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 6.1e-162 574.3 337 84.3
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 7.4e-144 514.2 333 75.7
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 5.9e-141 504.6 334 74.9
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.3e-140 503.4 334 75.4
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.5e-139 499.2 338 73.7
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.2e-139 498.4 330 74.8
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.7e-138 495.7 317 76.7
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.0e-137 493.8 308 77.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 4.0e-137 491.9 386 65.8
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 7.4e-136 487.6 337 72.4
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.7e-135 486.5 339 72.9
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.2e-135 486.1 328 74.4
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.8e-135 485.7 336 73.2
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 4.8e-135 485.0 329 74.5
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 6.3e-135 484.6 335 71.3
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.1e-134 483.8 331 72.2
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.4e-134 482.6 314 75.8
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 4.1e-134 481.9 333 72.4
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 9.1e-134 480.7 328 71.3
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.6e-133 479.9 292 79.8
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.0e-133 479.6 312 76.3
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.7e-132 476.5 339 72.0
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 6.5e-132 474.6 289 77.2
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.5e-131 473.4 283 77.4
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 3.2e-131 472.2 292 77.7
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 4.2e-131 471.9 329 69.6
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 4.2e-131 471.9 335 71.0
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 5.5e-131 471.5 284 81.0
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 7.2e-131 471.1 345 70.1
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.7e-130 469.2 332 69.6
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.0e-129 467.2 297 77.8
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.3e-129 466.1 297 77.8
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 4.0e-129 465.3 281 78.3
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 8.8e-129 464.2 333 69.1
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.2e-128 463.8 335 68.4
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.5e-128 463.4 279 79.2
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.6e-128 462.6 314 73.6
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 3.4e-128 462.2 336 70.5
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 4.4e-128 461.8 336 68.8
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 7.5e-128 461.1 283 77.7
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.3e-127 460.3 313 71.9
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.8e-127 459.1 280 76.4
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.4e-126 456.8 335 69.0
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 2.4e-126 456.1 280 75.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 9.1e-126 454.1 300 72.0
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 2.0e-125 453.0 314 70.1
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 2.7e-125 452.6 407 60.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 4.5e-125 451.8 281 76.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 8.5e-124 447.6 338 67.5
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.1e-123 447.2 333 67.3
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.5e-123 446.8 284 77.8
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.9e-123 446.4 342 66.1
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.9e-123 446.4 342 66.4
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.9e-123 446.4 337 67.7
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 5.5e-123 444.9 337 67.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 5.5e-123 444.9 342 65.8
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.2e-122 443.7 331 66.5
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.2e-122 443.7 284 75.0
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.6e-122 443.4 303 71.3
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 2.1e-122 443.0 280 74.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.7e-122 442.6 331 66.2
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.7e-122 442.6 284 75.4
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.7e-122 442.6 278 75.2
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 3.6e-122 442.2 310 69.7
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 4.7e-122 441.8 338 66.0
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.7e-122 441.8 278 75.2
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 4.7e-122 441.8 261 79.7
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.0e-121 440.7 344 67.2
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.0e-121 440.7 298 72.8
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.4e-121 440.3 309 70.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.0e-120 436.4 311 71.4
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.0e-120 436.4 334 65.3
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 2.0e-120 436.4 362 62.4
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.3e-119 433.7 296 71.6
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 8.3e-119 431.0 279 73.1
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 5.9e-117 424.9 279 74.9
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 9.5e-115 417.5 282 70.6
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 9.5e-115 417.5 438 52.7
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.0e-113 414.1 311 66.6
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.4e-113 413.7 251 78.1
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.6e-109 400.2 229 83.8
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 4.3e-107 392.1 275 68.0
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 7.3e-107 391.3 329 63.5
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.4e-102 377.1 305 62.3
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.6e-98 363.6 314 62.4
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.9e-95 352.8 288 57.3
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.5e-91 340.5 283 64.7
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 3.6e-90 335.9 321 57.0
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.8e-89 333.6 285 56.1
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 9.9e-88 327.8 271 60.1
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.5e-83 313.2 283 52.7
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.1e-81 307.8 257 56.8
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.1e-81 307.8 292 55.1
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.1e-73 281.2 157 79.6
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.0e-68 264.6 161 75.8
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.9e-67 260.4 147 83.0
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.1e-60 235.7 163 71.2
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.9e-59 233.8 134 81.3
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.4e-57 227.6 135 79.3
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 3.4e-56 223.0 272 43.8
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.5e-51 206.8 281 44.1
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.2e-46 189.5 136 62.5
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 3.7e-42 176.4 112 79.5
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.5e-32 142.9 315 33.3
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.0e-31 141.7 320 30.6
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 3.9e-28 129.8 285 33.3
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.0e-16 90.9 59 66.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 3.8e-15 86.7 99 47.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 4.8e-10 69.7 50 60.0


User provided reference genes

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