Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.7e-48 195.7 99 100.0
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 8.5e-48 193.4 99 94.9
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 8.5e-48 193.4 99 94.9
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 1.8e-42 175.6 97 86.6
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 4.1e-42 174.5 97 89.7
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 9.1e-42 173.3 97 87.6
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 5.9e-41 170.6 97 85.6
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.0e-40 169.9 97 83.5
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.0e-40 169.9 97 83.5
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 3.8e-40 167.9 97 85.6
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 1.6e-38 162.5 96 84.4
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.4e-37 159.5 97 79.4
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 4.0e-37 157.9 97 76.3
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 4.0e-37 157.9 97 77.3
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 6.8e-37 157.1 99 75.8
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 6.8e-37 157.1 93 79.6
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 8.8e-37 156.8 97 75.3
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 8.8e-37 156.8 91 80.2
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 1.2e-36 156.4 94 81.9
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 2.6e-36 155.2 99 73.7
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 2.6e-36 155.2 93 79.6
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 5.7e-36 154.1 93 78.5
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 5.7e-36 154.1 95 75.8
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 7.5e-36 153.7 99 75.8
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 7.5e-36 153.7 97 74.2
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 7.5e-36 153.7 97 79.4
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.3e-35 152.9 97 74.2
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.7e-35 152.5 100 75.0
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.7e-35 152.5 97 72.2
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 1.7e-35 152.5 91 75.8
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 2.8e-35 151.8 100 74.0
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.9e-35 151.0 93 77.4
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.9e-35 151.0 93 77.4
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 1.1e-34 149.8 92 75.0
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 1.4e-34 149.4 100 73.0
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 1.4e-34 149.4 100 73.0
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 1.4e-34 149.4 100 73.0
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 1.4e-34 149.4 100 73.0
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.4e-34 149.4 92 77.2
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.4e-34 149.4 93 76.3
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.8e-34 149.1 93 74.2
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 1.8e-34 149.1 98 74.5
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.4e-34 148.7 93 76.3
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 3.1e-34 148.3 90 78.9
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.4e-34 147.5 93 75.3
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.4e-34 147.5 93 75.3
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 5.4e-34 147.5 95 71.6
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 1.2e-33 146.4 99 74.7
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 1.2e-33 146.4 92 76.1
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 1.6e-33 146.0 95 71.6
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 1.6e-33 146.0 95 71.6
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 1.6e-33 146.0 95 71.6
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 2.0e-33 145.6 95 71.6
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 2.0e-33 145.6 94 74.5
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 2.7e-33 145.2 95 70.5
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 2.7e-33 145.2 95 72.6
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 2.7e-33 145.2 95 72.6
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 3.5e-33 144.8 95 71.6
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 4.5e-33 144.4 97 72.2
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 4.5e-33 144.4 97 72.2
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 5.9e-33 144.1 94 71.3
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 5.9e-33 144.1 97 71.1
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 5.9e-33 144.1 97 73.2
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 7.8e-33 143.7 91 76.9
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 7.8e-33 143.7 97 74.2
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 1.0e-32 143.3 97 74.2
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.3e-32 142.9 97 68.0
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.3e-32 142.9 91 73.6
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 2.3e-32 142.1 97 78.4
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 3.8e-32 141.4 99 70.7
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 6.6e-32 140.6 99 74.7
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 6.6e-32 140.6 99 74.7
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.1e-31 139.8 99 73.7
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.5e-31 139.4 99 73.7
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 1.5e-31 139.4 97 69.1
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 3.3e-31 138.3 97 67.0
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 3.3e-31 138.3 99 73.7
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 5.6e-31 137.5 91 68.1
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 7.3e-31 137.1 93 76.3
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 7.3e-31 137.1 97 75.3
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.2e-30 136.3 98 70.4
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 1.6e-30 136.0 99 69.7
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 2.1e-30 135.6 101 71.3
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 2.1e-30 135.6 97 70.1
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 2.8e-30 135.2 97 66.0
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 6.1e-30 134.0 99 73.7
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.0e-29 133.3 98 69.4
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 1.0e-29 133.3 96 66.7
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 1.0e-29 133.3 99 68.7
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 4.0e-29 131.3 97 66.0
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 6.8e-29 130.6 92 71.7
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 1.5e-28 129.4 100 66.0
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.6e-28 128.6 99 67.7
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 7.5e-28 127.1 101 70.3
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 1.7e-27 125.9 97 66.0
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.7e-27 124.8 93 67.7
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 3.7e-27 124.8 101 68.3
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 6.4e-27 124.0 93 61.3
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.4e-26 122.1 101 64.4
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 3.2e-26 121.7 95 61.1
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 3.2e-26 121.7 97 63.9
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 5.4e-26 120.9 85 74.1
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 5.4e-26 120.9 85 74.1
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.6e-25 119.4 101 63.4
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 4.6e-25 117.9 88 69.3
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 7.8e-25 117.1 78 70.5
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 1.0e-24 116.7 86 62.8
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.3e-24 116.3 101 63.4
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 3.9e-24 114.8 93 62.4
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 8.6e-24 113.6 86 64.0
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 1.9e-23 112.5 93 64.5
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 7.3e-23 110.5 101 57.4
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 1.2e-22 109.8 95 63.2
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.1e-21 106.7 79 70.9
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.3e-21 105.5 91 59.3
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.5e-20 102.8 63 74.6
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.4e-20 101.7 100 52.0
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.3e-19 99.8 92 54.3
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 3.7e-19 98.2 90 58.9
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 6.4e-19 97.4 91 59.3
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.9e-15 85.9 95 44.2
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 2.1e-14 82.4 98 50.0
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 8.1e-14 80.5 95 50.5
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 5.2e-13 77.8 97 48.5
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 2.0e-12 75.9 95 49.5
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 4.9e-11 71.2 40 72.5
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 4.6e-09 64.7 52 51.9
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.7e-08 62.8 56 57.1
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 6.6e-08 60.8 99 40.4


User provided reference genes

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