Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.2e-61 240.0 147 100.0
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.2e-60 235.7 147 90.5
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.2e-52 209.1 136 97.8
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 2.9e-52 208.8 148 77.0
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 6.5e-52 207.6 147 85.0
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.3e-49 199.1 138 93.5
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.7e-42 175.6 140 69.3
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 1.4e-41 173.3 146 63.0
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 1.4e-41 173.3 147 63.9
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 4.4e-40 168.3 149 61.7
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.4e-38 162.5 147 61.2
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.3e-36 156.8 148 61.5
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.3e-36 156.8 147 59.9
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 3.8e-36 155.2 149 58.4
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 3.2e-35 152.1 147 56.5
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 5.5e-35 151.4 149 59.1
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 5.5e-35 151.4 147 59.2
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 1.2e-34 150.2 147 57.8
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 1.6e-34 149.8 147 57.1
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 6.1e-34 147.9 156 59.0
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.4e-33 146.7 147 56.5
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.8e-33 146.4 149 66.4
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.7e-31 139.8 149 55.0
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 2.2e-31 139.4 188 45.7
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 2.8e-31 139.0 147 59.9
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 2.8e-31 139.0 147 59.9
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 2.8e-31 139.0 147 56.5
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 2.8e-31 139.0 148 55.4
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 4.8e-31 138.3 147 55.1
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 4.8e-31 138.3 147 53.7
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 4.8e-31 138.3 147 57.8
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.3e-31 137.9 140 51.4
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 6.3e-31 137.9 147 55.1
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.4e-30 136.7 138 57.2
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.4e-30 136.0 140 50.7
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 3.1e-30 135.6 147 51.7
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 3.1e-30 135.6 147 52.4
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 5.3e-30 134.8 152 54.6
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 5.3e-30 134.8 151 54.3
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 5.9e-29 131.3 147 51.7
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 5.9e-29 131.3 134 56.7
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.3e-28 130.2 138 51.4
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 5.0e-28 128.3 143 52.4
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.5e-27 126.7 140 58.6
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.2e-27 125.6 87 71.3
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 5.5e-27 124.8 149 63.8
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 5.5e-27 124.8 87 71.3
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 9.4e-27 124.0 141 50.4
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 4.7e-26 121.7 139 50.4
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 4.7e-26 121.7 148 50.0
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 6.1e-26 121.3 148 50.0
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 6.1e-26 121.3 148 50.0
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 6.1e-26 121.3 148 50.0
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.0e-25 120.6 87 65.5
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.4e-25 120.2 90 63.3
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 1.8e-25 119.8 80 76.2
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.8e-25 119.8 148 49.3
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.2e-24 117.1 81 74.1
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 5.7e-24 114.8 92 64.1
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 9.8e-24 114.0 93 66.7
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 1.3e-23 113.6 92 62.0
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.3e-23 113.6 92 64.1
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 3.7e-23 112.1 87 63.2
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 8.3e-23 110.9 99 57.6
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 1.1e-22 110.5 73 72.6
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.1e-22 110.5 90 65.6
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.4e-22 110.2 96 61.5
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 1.8e-22 109.8 80 67.5
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 2.4e-22 109.4 90 63.3
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.1e-22 109.0 90 62.2
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 4.1e-22 108.6 96 61.5
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 4.1e-22 108.6 90 60.0
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 9.1e-22 107.5 90 58.9
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 1.2e-21 107.1 88 64.8
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.2e-21 107.1 82 64.6
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 2.7e-21 105.9 85 65.9
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 3.5e-21 105.5 176 42.0
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 2.9e-20 102.4 90 55.6
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.1e-19 100.5 65 70.8
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.1e-19 100.5 82 63.4
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.1e-19 100.5 82 63.4
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.9e-19 99.8 71 69.0
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 5.5e-19 98.2 138 44.2
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 1.2e-18 97.1 87 58.6
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 1.6e-18 96.7 87 60.9
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 6.1e-18 94.7 61 75.4
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 1.4e-17 93.6 69 68.1
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 8.9e-17 90.9 77 59.7
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.2e-15 86.3 64 68.8
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.2e-15 86.3 90 48.9
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 1.1e-14 84.0 104 53.8
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 1.4e-14 83.6 60 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 9.2e-14 80.9 90 47.8
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 9.2e-14 80.9 99 53.5
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 5.9e-13 78.2 59 66.1
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 1.2e-10 70.5 95 43.2
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 1.6e-10 70.1 111 44.1
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 5.2e-09 65.1 76 48.7
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 8.9e-09 64.3 64 51.6
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 1.9e-06 56.6 73 39.7


User provided reference genes

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