Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A11G310900 Gossypium hirsutum HOM05D008862 ORTHO05D005392 1.2e-18 96.3 81 100.0
Gorai.007G358200 Gossypium raimondii HOM05D008862 ORTHO05D005392 6.6e-14 80.5 81 67.9
Gohir.D11G327300 Gossypium hirsutum HOM05D008862 ORTHO05D005392 1.1e-13 79.7 81 66.7
Gorai.007G358400 Gossypium raimondii HOM05D008862 ORTHO05D005392 1.2e-12 76.3 81 66.7
Gorai.007G358800 Gossypium raimondii HOM05D008862 ORTHO05D020803 1.4e-11 72.8 80 77.5
Gohir.A11G311166 Gossypium hirsutum HOM05D008862 ORTHO05D005392 1.8e-11 72.4 76 80.3
Gohir.A11G311066 Gossypium hirsutum HOM05D008862 ORTHO05D005392 2.3e-11 72.0 81 74.1
Gohir.D11G327650 Gossypium hirsutum HOM05D008862 ORTHO05D020803 2.3e-11 72.0 80 75.0
Gohir.D11G327600 Gossypium hirsutum HOM05D008862 ORTHO05D005392 3.1e-11 71.6 81 79.0
Gorai.007G358700 Gossypium raimondii HOM05D008862 ORTHO05D005392 3.1e-11 71.6 81 79.0
Gorai.007G358300 Gossypium raimondii HOM05D008862 ORTHO05D047958 8.9e-11 70.1 79 64.6
Gohir.D11G327800 Gossypium hirsutum HOM05D008862 ORTHO05D005392 2.0e-10 68.9 81 77.8
Gorai.007G359000 Gossypium raimondii HOM05D008862 ORTHO05D005392 2.0e-10 68.9 81 77.8
Gohir.D11G328000 Gossypium hirsutum HOM05D008862 ORTHO05D020803 7.5e-10 67.0 80 85.0
Gohir.D11G328050 Gossypium hirsutum HOM05D008862 ORTHO05D020803 7.5e-10 67.0 80 85.0
Gorai.007G358500 Gossypium raimondii HOM05D008862 ORTHO05D005392 7.5e-10 67.0 81 85.2
Gorai.007G359200 Gossypium raimondii HOM05D008862 ORTHO05D020803 7.5e-10 67.0 80 85.0
Gohir.D11G327450 Gossypium hirsutum HOM05D008862 ORTHO05D005392 1.7e-09 65.9 81 84.0
Gohir.A11G311033 Gossypium hirsutum HOM05D008862 ORTHO05D005392 2.2e-09 65.5 81 85.2
Gohir.D11G327400 Gossypium hirsutum HOM05D008862 ORTHO05D005392 2.9e-09 65.1 79 65.8
Gohir.D11G327900 Gossypium hirsutum HOM05D008862 ORTHO05D020803 2.9e-09 65.1 80 83.8
Gorai.007G359100 Gossypium raimondii HOM05D008862 ORTHO05D020803 2.9e-09 65.1 80 83.8
Gohir.D11G327700 Gossypium hirsutum HOM05D008862 ORTHO05D005392 3.7e-09 64.7 81 85.2
Gorai.007G358900 Gossypium raimondii HOM05D008862 ORTHO05D005392 3.7e-09 64.7 81 85.2
Gorai.007G358600 Gossypium raimondii HOM05D008862 ORTHO05D005392 4.9e-09 64.3 81 82.7
Gohir.D11G327500 Gossypium hirsutum HOM05D008862 ORTHO05D005392 1.1e-08 63.2 81 82.7
Gohir.A11G311232 Gossypium hirsutum HOM05D008862 ORTHO05D218345 4.1e-08 61.2 80 81.2
Gohir.A11G311300 Gossypium hirsutum HOM05D008862 ORTHO05D005392 5.4e-08 60.8 81 82.7
Gohir.A11G311100 Gossypium hirsutum HOM05D008862 ORTHO05D005392 9.2e-08 60.1 81 75.3
Duzib106G1083 Durio zibethinus HOM05D005524 ORTHO05D005392 1.2e-07 59.7 81 54.3
Gohir.A11G311000 Gossypium hirsutum HOM05D008862 ORTHO05D047958 1.2e-07 59.7 79 58.2
Gohir.A01G195800 Gossypium hirsutum HOM05D008862 ORTHO05D019241 3.5e-07 58.2 81 71.6
Duzib128G1940 Durio zibethinus HOM05D005524 ORTHO05D005392 6.0e-07 57.4 81 49.4
Duzib093G2098 Durio zibethinus HOM05D005524 ORTHO05D005392 2.3e-06 55.5 81 50.6
Thecc.05G164300 Theobroma cacao HOM05D005524 ORTHO05D005392 3.0e-06 55.1 81 49.4
Gohir.D01G186200 Gossypium hirsutum HOM05D008862 ORTHO05D019241 3.9e-06 54.7 81 67.9
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 6.6e-06 53.9 81 48.1
Eucgr.A02403 Eucalyptus grandis HOM05D005524 ORTHO05D005392 6.6e-06 53.9 81 51.9
Gohir.D01G186100 Gossypium hirsutum HOM05D008862 ORTHO05D019241 6.6e-06 53.9 81 70.4
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 8.6e-06 53.5 81 48.1


User provided reference genes

Program Settings