Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.9e-34 147.9 70 100.0
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.3e-29 130.2 69 91.3
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 5.1e-23 110.5 67 82.1
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 8.8e-23 109.8 67 77.6
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.1e-22 109.4 69 75.4
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.1e-22 109.4 69 75.4
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 2.0e-22 108.6 67 76.1
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 2.0e-22 108.6 69 78.3
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.7e-22 107.1 69 73.9
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 7.4e-22 106.7 66 78.8
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 7.4e-22 106.7 69 75.4
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 7.4e-22 106.7 66 80.3
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 9.7e-22 106.3 66 78.8
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.7e-21 105.5 66 78.8
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.7e-21 105.5 66 78.8
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 2.2e-21 105.1 69 75.4
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 2.2e-21 105.1 68 76.5
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 2.4e-20 101.7 68 72.1
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 4.1e-20 100.9 69 73.9
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 1.2e-19 99.4 64 75.0
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 1.2e-19 99.4 58 81.0
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 4.5e-19 97.4 64 76.6
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.9e-18 94.7 66 69.7
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 6.5e-18 93.6 66 71.2
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 1.1e-17 92.8 64 71.9
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-17 92.0 59 78.0
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 3.2e-17 91.3 66 68.2
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 9.4e-17 89.7 64 70.3
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 1.6e-16 89.0 58 75.9
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 6.1e-16 87.0 57 77.2
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 8.0e-16 86.7 66 65.2
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 1.4e-15 85.9 62 69.4
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 3.0e-15 84.7 65 70.8
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.2e-15 84.0 48 83.3
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 3.3e-14 81.3 61 65.6
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 4.4e-14 80.9 47 83.0
Prupe.1G135800 Prunus persica HOM05D007671 ORTHO05D009777 7.4e-14 80.1 52 73.1
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 9.7e-14 79.7 53 67.9
Migut.N02115 Erythranthe guttata HOM05D007671 ORTHO05D009777 1.7e-13 79.0 48 79.2
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 3.7e-13 77.8 55 72.7
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 6.3e-13 77.0 53 71.7
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 1.4e-12 75.9 59 66.1
Potri.008G047850 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.8e-12 75.5 61 67.2
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.6e-11 72.4 57 64.9
SHI08305 Sapria himalayana HOM05D007671 ORTHO05D009777 1.6e-11 72.4 67 59.7
Prupe.2G064500 Prunus persica HOM05D007671 ORTHO05D009777 2.6e-11 71.6 55 69.1
Thhalv10006404m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 3.5e-11 71.2 67 61.2
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 2.2e-10 68.6 59 57.6
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 8.5e-10 66.6 58 60.3
Gohir.D02G056966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 8.5e-10 66.6 35 88.6
Os08g0114150 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.1e-09 66.2 45 73.3
Pp3c12_8280 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.5e-09 65.9 72 59.7
Pp3c12_8281 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.5e-09 65.9 72 59.7
Pp3c12_8290 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.5e-09 65.9 72 59.7
Manes.06G038352 Manihot esculenta HOM05D007671 ORTHO05D009777 2.5e-09 65.1 64 59.4
Gohir.A08G235950 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.2e-09 64.7 35 88.6
Gohir.D08G256350 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.2e-09 64.7 35 88.6
FAN24G3042 Fragaria x ananassa HOM05D007671 ORTHO05D009777 5.5e-09 63.9 35 88.6
Prupe.1G136100 Prunus persica HOM05D007671 ORTHO05D009777 9.4e-09 63.2 38 81.6
Aqoxy6G01862 Aquilegia oxysepala HOM05D007671 ORTHO05D009777 2.1e-08 62.0 35 85.7
FAN20G2582 Fragaria x ananassa HOM05D007671 ORTHO05D035424 6.1e-08 60.5 43 65.1
Pp3c23_15500 Physcomitrium patens HOM05D007671 ORTHO05D009777 1.8e-07 58.9 37 81.1
Mapoly0010s0188 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.3e-07 58.5 39 76.9
Mapoly0170s0037 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.3e-07 58.5 39 76.9
Os02g0808601 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.3e-07 58.5 40 62.5
Mapoly3284s0001 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.0e-07 58.2 42 73.8
Mapoly0130s0018 Marchantia polymorpha HOM05D007671 ORTHO05D009777 6.7e-07 57.0 69 49.3
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 8.8e-07 56.6 38 65.8
Mapoly0025s0123 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.5e-06 55.8 35 80.0
Mapoly0045s0139 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.5e-06 55.8 38 76.3
Mapoly0012s0007 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.6e-06 55.1 34 82.4
Mapoly0047s0081 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.6e-06 55.1 34 82.4
Mapoly0124s0032 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.6e-06 55.1 34 82.4
Mapoly0168s0020 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.6e-06 55.1 34 82.4
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.6e-06 55.1 38 65.8
Os02g0811501 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 3.3e-06 54.7 40 60.0
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 3.3e-06 54.7 43 58.1


User provided reference genes

Program Settings