Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 9.8e-83 310.1 155 100.0
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.2e-61 240.0 127 95.3
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 9.6e-46 187.2 155 69.0
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.4e-44 183.3 154 66.9
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.0e-43 179.5 149 64.4
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.0e-43 179.5 154 66.2
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 2.0e-43 179.5 151 70.2
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 7.6e-43 177.6 151 66.9
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 9.9e-43 177.2 150 68.0
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.7e-42 176.4 156 64.7
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 5.4e-41 171.4 149 69.1
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.1e-40 169.5 151 66.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 6.6e-39 164.5 152 63.8
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 6.6e-39 164.5 152 63.8
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 8.7e-39 164.1 151 63.6
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-38 163.7 87 95.4
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.5e-38 163.3 148 62.8
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.3e-38 162.2 154 63.6
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 5.6e-38 161.4 153 62.7
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.3e-37 160.2 151 58.9
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 1.3e-37 160.2 169 56.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.1e-37 159.5 150 61.3
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.1e-37 159.5 155 61.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.8e-37 159.1 150 61.3
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 3.6e-37 158.7 149 62.4
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.8e-36 156.4 149 60.4
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 3.1e-36 155.6 149 60.4
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 5.3e-36 154.8 153 64.7
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 5.3e-36 154.8 157 58.0
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 6.9e-36 154.5 152 57.2
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 9.0e-36 154.1 151 59.6
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.2e-35 153.7 148 60.1
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.2e-35 153.7 154 55.8
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.2e-35 153.7 157 58.0
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.5e-35 153.3 156 59.0
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 3.4e-35 152.1 151 58.3
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 3.4e-35 152.1 154 57.1
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 4.5e-35 151.8 167 56.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.3e-34 150.2 159 55.3
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.7e-34 149.8 148 56.8
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 1.7e-34 149.8 160 54.4
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 1.7e-34 149.8 148 58.1
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.2e-34 149.4 160 54.4
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 2.2e-34 149.4 155 54.8
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.9e-34 149.1 148 58.8
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 3.8e-34 148.7 148 59.5
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.4e-34 147.9 160 55.6
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 8.4e-34 147.5 149 58.4
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.4e-33 146.7 132 69.7
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 2.4e-33 146.0 149 55.0
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 3.2e-33 145.6 148 58.1
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 4.2e-33 145.2 152 56.6
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 5.4e-33 144.8 151 56.3
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.6e-32 143.3 136 61.8
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.6e-32 143.3 85 81.2
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.1e-32 142.9 150 57.3
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 7.9e-32 141.0 156 55.1
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.0e-31 140.6 85 80.0
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.3e-31 140.2 154 55.2
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.3e-31 140.2 125 60.8
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.3e-31 140.2 148 54.1
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.3e-31 139.4 156 53.8
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.3e-31 139.4 149 53.7
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 3.0e-31 139.0 170 54.7
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 3.0e-31 139.0 150 55.3
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 5.1e-31 138.3 152 52.6
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.7e-31 137.9 97 72.2
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-30 137.1 91 75.8
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.9e-30 136.3 153 52.9
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.9e-30 136.3 152 54.6
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 4.3e-30 135.2 156 53.2
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 7.4e-30 134.4 148 54.1
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 9.6e-30 134.0 121 61.2
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.6e-29 133.3 98 71.4
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.2e-29 131.3 117 60.7
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 6.9e-28 127.9 106 61.3
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.2e-27 127.1 89 71.9
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.5e-27 126.7 106 65.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.6e-27 125.9 71 85.9
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 5.8e-27 124.8 153 47.7
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.8e-27 124.8 117 58.1
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 7.6e-27 124.4 149 53.7
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.7e-26 123.2 128 54.7
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.2e-26 122.9 148 50.7
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.1e-25 120.6 132 52.3
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.1e-25 120.6 133 50.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 7.1e-25 117.9 124 54.8
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 7.1e-25 117.9 100 60.0
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.6e-24 116.7 99 60.6
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.6e-24 116.7 82 65.9
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 4.6e-24 115.2 147 49.0
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.3e-23 113.6 148 48.0
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 3.0e-23 112.5 100 59.0
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 3.0e-23 112.5 154 46.1
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 3.0e-23 112.5 100 59.0
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 6.7e-23 111.3 163 46.6
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.1e-21 106.3 153 45.1
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.8e-21 105.9 154 45.5
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 2.8e-21 105.9 63 79.4
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 4.8e-21 105.1 91 58.2
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 8.2e-21 104.4 117 48.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 8.2e-21 104.4 151 47.7
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 2.6e-19 99.4 106 58.5
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 7.6e-19 97.8 113 45.1
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.0e-18 97.4 91 57.1
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 3.2e-17 92.4 92 51.1
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.3e-15 86.3 113 43.4
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 4.8e-13 78.6 45 84.4
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.0e-11 73.2 46 76.1
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.7e-10 70.1 43 76.7
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.2e-09 65.5 45 71.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.0e-07 60.8 76 39.5
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 3.3e-06 55.8 32 75.0


User provided reference genes

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