Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 5.5e-109 397.5 182 100.0
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.3e-107 392.9 182 98.4
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 1.3e-107 392.9 182 98.4
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 3.1e-104 381.7 182 94.0
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.4e-99 366.3 182 90.1
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 3.3e-98 361.7 182 87.9
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 3.3e-98 361.7 182 87.9
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 4.3e-98 361.3 182 87.9
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.3e-97 359.8 182 87.4
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 2.2e-97 359.0 182 87.4
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 6.3e-97 357.5 182 86.3
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 6.3e-97 357.5 182 86.3
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.1e-96 356.7 182 85.7
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.1e-96 356.7 182 85.7
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.1e-96 356.7 182 85.7
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.4e-96 356.3 181 85.1
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 1.4e-96 356.3 182 86.8
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 1.4e-96 356.3 182 86.8
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 2.4e-96 355.5 182 86.3
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 3.1e-96 355.1 182 85.7
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 4.1e-96 354.8 182 86.8
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 5.3e-96 354.4 182 85.2
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.9e-96 354.0 182 85.7
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 9.1e-96 353.6 182 84.6
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.5e-95 352.8 182 86.3
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.5e-95 352.8 182 84.6
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.5e-95 352.8 182 85.7
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.6e-95 352.1 182 84.1
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 3.4e-95 351.7 182 84.6
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 4.5e-95 351.3 181 86.2
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 4.5e-95 351.3 182 85.7
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 5.9e-95 350.9 182 85.2
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 5.9e-95 350.9 182 86.8
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.7e-95 350.5 182 84.6
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.3e-94 349.7 182 85.2
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.3e-94 349.7 182 84.6
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.7e-94 349.4 182 84.6
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 2.2e-94 349.0 182 84.1
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 3.8e-94 348.2 182 83.5
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 5.0e-94 347.8 182 83.5
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 6.5e-94 347.4 182 84.1
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 6.5e-94 347.4 182 84.1
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 1.1e-93 346.7 182 84.1
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.1e-93 346.7 182 84.1
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.1e-93 346.7 182 83.0
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 2.5e-93 345.5 179 84.4
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 3.2e-93 345.1 182 84.1
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 4.2e-93 344.7 182 83.5
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 4.2e-93 344.7 182 84.1
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 5.5e-93 344.4 182 85.2
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 5.5e-93 344.4 180 83.3
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 7.2e-93 344.0 182 84.1
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 7.2e-93 344.0 182 81.3
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 1.2e-92 343.2 182 81.9
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 1.6e-92 342.8 182 83.5
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.6e-92 342.8 182 83.5
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.6e-92 342.8 182 84.1
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 2.1e-92 342.4 182 84.1
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 2.7e-92 342.0 182 84.1
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 2.7e-92 342.0 182 82.4
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 3.6e-92 341.7 182 83.0
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 3.6e-92 341.7 182 84.6
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 3.6e-92 341.7 182 84.1
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 3.6e-92 341.7 182 80.8
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 3.6e-92 341.7 182 80.8
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 7.9e-92 340.5 179 83.2
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 1.0e-91 340.1 182 81.9
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.4e-91 339.7 182 84.1
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 3.9e-91 338.2 182 82.4
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 3.9e-91 338.2 182 82.4
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 8.8e-91 337.0 182 81.3
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.5e-90 336.3 182 81.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.5e-90 336.3 182 81.9
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 2.6e-90 335.5 182 83.0
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.6e-90 335.5 182 81.9
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 4.4e-90 334.7 182 82.4
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 5.7e-90 334.3 182 83.0
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 1.3e-89 333.2 182 81.9
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.7e-89 332.8 182 82.4
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 1.7e-89 332.8 182 82.4
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 1.7e-89 332.8 182 82.4
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.7e-89 332.8 198 75.8
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.7e-89 332.8 179 81.0
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.6e-87 326.2 184 78.8
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 3.2e-85 318.5 182 77.5
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 5.2e-83 311.2 221 67.9
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 5.2e-75 284.6 139 89.9
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 2.2e-73 279.3 176 67.0
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 2.8e-73 278.9 148 83.1
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 2.8e-73 278.9 177 67.2
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 7.0e-72 274.2 179 67.0
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 3.2e-69 265.4 176 63.6
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 4.2e-69 265.0 134 85.8
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 7.2e-69 264.2 134 85.1
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 2.3e-67 259.2 134 82.8
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 8.8e-67 257.3 133 81.2
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.0e-66 256.1 180 62.2
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.3e-65 253.4 125 87.2
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 4.3e-53 211.8 127 72.4
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 7.3e-53 211.1 110 81.8
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.5e-50 203.4 162 56.2
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.4e-50 202.2 107 78.5
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 4.4e-50 201.8 102 85.3
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 3.7e-49 198.7 176 54.5
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.0e-46 190.7 107 74.8
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 3.0e-46 189.1 169 52.1
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 5.2e-27 125.2 186 35.5
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 8.4e-25 117.9 185 36.2
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 2.4e-24 116.3 163 38.0
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 1.3e-22 110.5 61 77.0
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.7e-22 110.2 68 69.1
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.9e-19 98.2 51 80.4
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 6.2e-12 75.1 41 78.0
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.4e-11 73.9 135 34.1
SEGI_18314 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 5.1e-06 55.5 68 44.1


User provided reference genes

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