Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 9.1e-47 189.9 96 100.0
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 7.7e-46 186.8 96 99.0
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 7.7e-46 186.8 96 99.0
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 3.0e-42 174.9 94 92.6
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 6.8e-42 173.7 94 91.5
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 6.8e-42 173.7 94 91.5
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.5e-41 172.6 94 90.4
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.2e-38 162.9 94 85.1
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 1.2e-38 162.9 94 86.2
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 2.0e-38 162.2 96 85.4
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.0e-37 159.8 95 81.1
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 6.6e-37 157.1 94 79.8
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 6.6e-37 157.1 95 80.0
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 8.6e-37 156.8 94 81.9
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.9e-36 155.6 94 80.9
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 4.3e-36 154.5 95 83.2
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 4.3e-36 154.5 95 83.2
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 4.3e-36 154.5 94 80.9
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 5.6e-36 154.1 94 80.9
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 9.5e-36 153.3 95 81.1
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.6e-35 152.5 94 79.8
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.6e-35 152.5 95 76.8
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 1.6e-35 152.5 95 75.8
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 2.1e-35 152.1 94 79.8
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.1e-35 152.1 94 80.9
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.1e-35 152.1 94 80.9
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 3.6e-35 151.4 94 78.7
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.0e-34 149.8 94 77.7
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-34 149.4 96 74.0
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.4e-34 149.4 94 77.7
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.4e-34 149.4 92 80.4
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 1.8e-34 149.1 94 77.7
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.3e-34 148.7 95 78.9
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 3.1e-34 148.3 94 77.7
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 3.1e-34 148.3 94 77.7
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 4.0e-34 147.9 92 79.3
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 4.0e-34 147.9 94 78.7
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 5.2e-34 147.5 94 77.7
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 5.2e-34 147.5 94 78.7
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 5.2e-34 147.5 94 74.5
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 6.8e-34 147.1 94 76.6
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 8.9e-34 146.7 96 72.9
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 8.9e-34 146.7 92 78.3
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 2.6e-33 145.2 92 77.2
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 3.4e-33 144.8 94 75.5
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 3.4e-33 144.8 94 75.5
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 5.8e-33 144.1 94 75.5
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 5.8e-33 144.1 92 78.3
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 5.8e-33 144.1 94 75.5
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 5.8e-33 144.1 94 75.5
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 7.5e-33 143.7 95 72.6
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 7.5e-33 143.7 94 75.5
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 9.8e-33 143.3 94 74.5
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.2e-32 142.1 94 74.5
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.2e-32 142.1 95 73.7
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.2e-32 142.1 95 73.7
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 2.2e-32 142.1 94 75.5
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 2.2e-32 142.1 95 75.8
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.9e-32 141.7 91 75.8
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 2.9e-32 141.7 94 74.5
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.9e-32 141.0 94 74.5
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.1e-31 139.8 94 73.4
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.4e-31 139.4 95 76.8
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.4e-31 138.7 94 72.3
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 9.2e-31 136.7 82 81.7
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 1.6e-30 136.0 96 76.0
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 1.6e-30 136.0 94 72.3
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 2.7e-30 135.2 94 70.2
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.3e-29 132.9 90 71.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.7e-29 132.5 95 70.5
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.7e-29 132.5 95 70.5
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.7e-29 132.5 95 70.5
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 3.9e-29 131.3 96 67.7
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.0e-29 131.0 94 69.1
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 8.6e-29 130.2 93 68.8
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.1e-28 129.8 93 66.7
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 3.3e-28 128.3 95 68.4
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 5.6e-28 127.5 95 66.3
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 1.6e-27 125.9 94 63.8
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 4.7e-27 124.4 89 66.3
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 6.2e-27 124.0 69 92.8
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 3.1e-26 121.7 94 64.9
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 4.0e-26 121.3 75 78.7
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 4.0e-26 121.3 95 64.2
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 5.2e-26 120.9 92 69.6
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.4e-25 118.2 123 54.5
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.4e-25 117.9 69 81.2
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 4.4e-25 117.9 94 60.6
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 4.4e-25 117.9 94 60.6
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 4.4e-25 117.9 94 60.6
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 4.4e-25 117.9 94 60.6
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 4.4e-25 117.9 95 65.3
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 7.5e-25 117.1 95 62.1
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 1.7e-24 115.9 89 67.4
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 2.2e-24 115.5 94 60.6
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 2.2e-24 115.5 94 60.6
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.4e-24 114.0 69 82.6
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 5.4e-23 110.9 73 69.9
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 7.1e-23 110.5 68 75.0
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 4.6e-22 107.8 89 60.7
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 4.6e-22 107.8 84 66.7
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 6.0e-22 107.5 82 63.4
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 1.3e-21 106.3 81 64.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 1.6e-19 99.4 94 51.1
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 2.6e-17 92.0 67 71.6
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 6.4e-16 87.4 95 51.6
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.6e-14 82.8 67 61.2
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.1e-11 72.4 50 66.0
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 5.4e-07 57.8 91 39.6
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 7.1e-07 57.4 94 40.4
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 1.2e-06 56.6 95 38.9
CDE02G0421 Ceratophyllum demersum HOM05D000015 ORTHO05D003525 1.6e-06 56.2 72 40.3
Dinv13936 Davidia involucrata HOM05D000015 ORTHO05D009146 1.6e-06 56.2 98 35.7
CDE06G1972 Ceratophyllum demersum HOM05D000015 ORTHO05D003525 2.1e-06 55.8 73 39.7
Rhsim13G0150400 Rhododendron simsii HOM05D000015 ORTHO05D009146 3.5e-06 55.1 97 39.2
PSO541G1228 Papaver somniferum HOM05D000015 ORTHO05D009146 4.6e-06 54.7 56 53.6
QL03p004924 Quercus lobata HOM05D000015 ORTHO05D009146 6.0e-06 54.3 95 37.9
QL05p071991 Quercus lobata HOM05D000015 ORTHO05D009146 6.0e-06 54.3 95 37.9


User provided reference genes

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