Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A10G091750 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.9e-52 208.8 96 100.0
Gohir.A08G119166 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.2e-19 99.8 94 48.9
Gohir.A08G091300 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.1e-18 96.7 89 53.9
Gohir.A13G041750 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.1e-18 96.7 94 47.9
Gohir.A13G017966 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.1e-18 95.1 94 47.9
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.0e-17 92.4 94 48.9
Gohir.A13G164050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.6e-17 92.0 93 46.2
Gohir.A10G176350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 4.4e-17 91.3 94 45.7
Gohir.A10G122250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 9.9e-17 90.1 82 51.2
Gorai.008G075500 Gossypium raimondii HOM05D001383 ORTHO05D000309 1.3e-16 89.7 70 58.6
Gohir.A05G239250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.7e-16 89.4 81 50.6
Gohir.A12G071433 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.9e-16 88.6 70 58.6
Gohir.D08G061401 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.9e-16 88.6 94 47.9
Gohir.A13G051550 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.7e-16 88.2 94 43.6
Gohir.D12G069001 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.9e-15 85.9 70 55.7
Gohir.A01G116801 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.2e-14 83.2 81 46.9
Gohir.A08G203366 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.7e-14 82.0 70 51.4
Gohir.A01G145614 Gossypium hirsutum HOM05D001383 ORTHO05D000309 7.8e-14 80.5 82 46.3
Gohir.A09G200200 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.0e-13 80.1 81 45.7
Gohir.A13G143901 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.0e-13 78.6 87 42.5
Gohir.A01G201950 Gossypium hirsutum HOM05D001383 ORTHO05D000309 5.1e-13 77.8 84 48.8
Gohir.D10G135250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.6e-13 77.4 70 51.4
Gohir.D11G247150 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.6e-13 77.4 80 48.8
Gohir.A12G210350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.5e-12 76.3 81 45.7
Gohir.A06G141133 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.2e-11 70.9 67 49.3
Nitab4.5_0001977g0130 Nicotiana tabacum HOM05D001383 ORTHO05D000309 6.2e-11 70.9 65 46.2
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 6.2e-11 70.9 68 44.1
Solyc03g094173.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 1.1e-10 70.1 63 49.2
DCAR_000974 Daucus carota HOM05D001383 ORTHO05D000309 1.4e-10 69.7 92 39.1
Nitab4.5_0002271g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-10 69.7 74 43.2
Nitab4.5_0001041g0150 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.8e-10 69.3 61 50.8
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 2.4e-10 68.9 68 41.2
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-10 68.2 67 43.3
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 5.2e-10 67.8 69 43.5
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 6.8e-10 67.4 68 39.7
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 6.8e-10 67.4 67 43.3
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 6.8e-10 67.4 67 43.3
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 6.8e-10 67.4 67 43.3
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 6.8e-10 67.4 67 43.3
Solyc01g060183.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 6.8e-10 67.4 83 38.6
Nitab4.5_0002043g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.2e-09 66.6 74 43.2
DCAR_026361 Daucus carota HOM05D001383 ORTHO05D000309 2.6e-09 65.5 89 38.2
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.4e-09 65.1 87 36.8
Nitab4.5_0003987g0040 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.4e-09 64.7 74 43.2
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 4.4e-09 64.7 89 37.1
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 4.4e-09 64.7 73 39.7
Nitab4.5_0005872g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.6e-09 63.9 79 41.8
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 9.9e-09 63.5 89 39.3
DCAR_031437 Daucus carota HOM05D001383 ORTHO05D000309 9.9e-09 63.5 70 38.6
CANSAT56G3744 Cannabis sativa HOM05D001383 ORTHO05D000309 1.3e-08 63.2 67 47.8
CANSAT80G1681 Cannabis sativa HOM05D001383 ORTHO05D000309 1.3e-08 63.2 67 47.8
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-08 62.8 66 45.5
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-08 62.8 66 45.5
DCAR_023922 Daucus carota HOM05D001383 ORTHO05D000309 2.2e-08 62.4 87 33.3
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 2.2e-08 62.4 63 46.0
Solyc03g083735.1 Solanum lycopersicum HOM05D008126 ORTHO05D000309 2.2e-08 62.4 50 50.0
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 2.9e-08 62.0 72 38.9
Gohir.A10G090350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.8e-08 61.6 66 45.5
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 4.9e-08 61.2 89 36.0
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.9e-08 61.2 87 34.5
Hma1.2p1_0896F.1_g233840 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.9e-08 61.2 87 36.8
DCAR_026902 Daucus carota HOM05D001383 ORTHO05D000309 6.4e-08 60.8 89 36.0
Lsat_1_v5_gn_8_117981 Lactuca sativa HOM05D001383 ORTHO05D000309 6.4e-08 60.8 72 37.5
Nitab4.5_0001650g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 6.4e-08 60.8 86 39.5
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 6.4e-08 60.8 63 44.4
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 8.4e-08 60.5 109 33.0
CANSAT80G0185 Cannabis sativa HOM05D001383 ORTHO05D000309 1.4e-07 59.7 65 44.6
Hma1.2p1_0512F.1_g169330 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-07 59.7 83 34.9
Lsat_1_v5_gn_0_6841 Lactuca sativa HOM05D001383 ORTHO05D000309 1.4e-07 59.7 86 38.4
Solyc07g150127.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 1.4e-07 59.7 83 38.6
CAN.G162.74 Capsicum annuum HOM05D004040 ORTHO05D000309 1.9e-07 59.3 83 34.9
Migut.O00432 Erythranthe guttata HOM05D001383 ORTHO05D000309 1.9e-07 59.3 86 32.6
Nitab4.5_0000087g0110 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.9e-07 59.3 64 43.8
Peaxi162Scf00030g00610 Petunia axillaris HOM05D027134 ORTHO05D000309 1.9e-07 59.3 83 33.7
DCAR_028616 Daucus carota HOM05D001383 ORTHO05D000309 2.4e-07 58.9 68 39.7
Nitab4.5_0009942g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.4e-07 58.9 82 41.5
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-07 58.9 63 44.4
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 3.2e-07 58.5 86 34.9
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.2e-07 58.5 83 37.3
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 58.5 63 44.4
Peaxi162Scf00101g00219 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 58.5 66 40.9
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 3.2e-07 58.5 78 41.0
DCAR_015783 Daucus carota HOM05D001383 ORTHO05D000309 4.2e-07 58.2 89 38.2
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.2e-07 58.2 82 36.6
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-07 58.2 78 39.7
SGA_v2.0_scaffold17G08080 Striga asiatica HOM05D001383 ORTHO05D000309 4.2e-07 58.2 58 46.6
Peaxi162Scf00575g00045 Petunia axillaris HOM05D001383 ORTHO05D000309 5.4e-07 57.8 63 44.4
SGA_v2.0_scaffold360G49893 Striga asiatica HOM05D033559 ORTHO05D000309 7.1e-07 57.4 85 35.3
SGA_v2.0_scaffold18G08221 Striga asiatica HOM05D012189 ORTHO05D000309 9.3e-07 57.0 58 44.8
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-06 56.6 98 33.7
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-06 56.6 82 36.6
Peaxi162Scf00215g00316 Petunia axillaris HOM05D004040 ORTHO05D000309 1.2e-06 56.6 73 38.4
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 1.2e-06 56.6 65 43.1
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 1.2e-06 56.6 89 34.8
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 1.2e-06 56.6 69 39.1
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 1.6e-06 56.2 69 39.1
SGA_v2.0_scaffold121G33159 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 56.2 76 35.5
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 56.2 104 33.7
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 55.8 105 34.3
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 2.1e-06 55.8 69 37.7
SGA_v2.0_scaffold179G39548 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 65 41.5
SGA_v2.0_scaffold238G43895 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 69 37.7
SGA_v2.0_scaffold309G48181 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 58 43.1
SGA_v2.0_scaffold55G19721 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 58 43.1
SGA_v2.0_scaffold5G03007 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-06 55.8 58 43.1
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 2.7e-06 55.5 63 44.4
Peaxi162Scf00323g00412 Petunia axillaris HOM05D001383 ORTHO05D000309 2.7e-06 55.5 62 43.5
COL.COLO4_33074 Corchorus olitorius HOM05D015200 ORTHO05D000309 3.5e-06 55.1 68 39.7
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-06 55.1 87 34.5
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-06 55.1 87 34.5
Nitab4.5_0001904g0050 Nicotiana tabacum HOM05D001383 ORTHO05D000309 3.5e-06 55.1 63 41.3
SGA_v2.0_scaffold59G20728 Striga asiatica HOM05D001383 ORTHO05D000309 3.5e-06 55.1 76 36.8
SGA_v2.0_scaffold88G27215 Striga asiatica HOM05D001383 ORTHO05D000309 3.5e-06 55.1 58 43.1
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 3.5e-06 55.1 88 38.6
Hma1.2p1_0787F.1_g217983 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.6e-06 54.7 82 35.4
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.6e-06 54.7 98 32.7
Nitab4.5_0007977g0060 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.6e-06 54.7 63 42.9
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 4.6e-06 54.7 63 42.9
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 4.6e-06 54.7 57 45.6
SGA_v2.0_scaffold257G45698 Striga asiatica HOM05D001383 ORTHO05D000309 4.6e-06 54.7 69 39.1
Hma1.2p1_2672F.1_g326690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.0e-06 54.3 83 33.7
Lsat_1_v5_gn_3_44981 Lactuca sativa HOM05D001383 ORTHO05D000309 6.0e-06 54.3 72 33.3
Lsat_1_v5_gn_4_67121 Lactuca sativa HOM05D001383 ORTHO05D000309 6.0e-06 54.3 72 33.3
Manes.13G089160 Manihot esculenta HOM05D001383 ORTHO05D000309 6.0e-06 54.3 95 37.9
Nitab4.5_0001942g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.0e-06 54.3 90 34.4
Nitab4.5_0005772g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.0e-06 54.3 98 34.7
Nitab4.5_0006994g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.0e-06 54.3 78 37.2
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 6.0e-06 54.3 63 42.9
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-06 54.3 71 36.6
SGA_v2.0_scaffold319G48539 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-06 54.3 69 37.7
SGA_v2.0_scaffold552G52878 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-06 54.3 84 35.7
vmacro20400 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 6.0e-06 54.3 69 33.3
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.8e-06 53.9 68 39.7
Nitab4.5_0000100g0180 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.8e-06 53.9 82 35.4
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 7.8e-06 53.9 67 40.3


User provided reference genes

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