Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A09G103400 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.0e-24 114.4 58 100.0
Gohir.A04G039316 Gossypium hirsutum HOM05D008354 ORTHO05D010055 4.7e-22 107.1 58 94.8
Gohir.A05G323748 Gossypium hirsutum HOM05D008354 ORTHO05D010055 4.7e-22 107.1 58 94.8
Gohir.D04G096644 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.7e-19 97.4 58 86.2
Gohir.A03G019700 Gossypium hirsutum HOM05D008354 ORTHO05D010055 8.3e-19 96.3 75 73.3
Gohir.A07G174583 Gossypium hirsutum HOM05D008354 ORTHO05D010055 4.6e-17 90.5 75 69.3
Gohir.D12G080900 Gossypium hirsutum HOM05D008354 ORTHO05D010055 6.0e-17 90.1 75 70.7
Gohir.D08G104600 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.7e-16 88.6 73 69.9
Lsat_1_v5_gn_2_20541 Lactuca sativa HOM05D008354 ORTHO05D010055 2.5e-15 84.7 72 68.1
Lsat_1_v5_gn_3_110420 Lactuca sativa HOM05D008354 ORTHO05D010055 2.5e-15 84.7 72 68.1
Lsat_1_v5_gn_4_147820 Lactuca sativa HOM05D008354 ORTHO05D010055 2.5e-15 84.7 72 68.1
Lsat_1_v5_gn_5_181860 Lactuca sativa HOM05D008354 ORTHO05D010055 2.5e-15 84.7 72 68.1
PGSC0003DMG401008784 Solanum tuberosum HOM05D008354 ORTHO05D010055 4.3e-15 84.0 72 68.1
Gohir.A09G101750 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.6e-14 82.0 45 93.3
Migut.D01398 Erythranthe guttata HOM05D008354 ORTHO05D010055 3.6e-14 80.9 72 66.7
Potri.013G092500 Populus trichocarpa HOM05D008354 ORTHO05D010055 8.1e-14 79.7 72 63.9
PGSC0003DMG400029000 Solanum tuberosum HOM05D008354 ORTHO05D010055 1.8e-13 78.6 72 65.3
MELO3C028020.2 Cucumis melo HOM05D008354 ORTHO05D010055 2.3e-13 78.2 68 67.6
DCAR_024575 Daucus carota HOM05D008354 ORTHO05D010055 6.8e-13 76.6 69 65.2
DCAR_031655 Daucus carota HOM05D008354 ORTHO05D010055 6.8e-13 76.6 69 65.2
LjContig00489g0002748 Lotus japonicus HOM05D008354 ORTHO05D010055 4.4e-12 73.9 61 67.2
Aqoxy38s013 Aquilegia oxysepala HOM05D008354 ORTHO05D010055 1.3e-11 72.4 72 61.1
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.3e-11 72.4 43 86.0
LjContig00315g0013064 Lotus japonicus HOM05D008354 ORTHO05D010055 8.3e-11 69.7 62 62.9
LjContig00439g0006222 Lotus japonicus HOM05D008354 ORTHO05D010055 8.3e-11 69.7 62 62.9
LjContig00446g0002728 Lotus japonicus HOM05D008354 ORTHO05D010055 8.3e-11 69.7 62 62.9
Gohir.D11G276000 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.4e-10 68.9 75 53.3
Gohir.1Z049582 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.2e-10 67.8 36 91.7
Gohir.A04G039501 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.2e-10 67.8 36 91.7
Gohir.D03G075240 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.2e-10 67.8 36 91.7
arahy.Tifrunner.gnm1.ann1.V91BB6 Arachis hypogaea HOM05D008354 ORTHO05D010055 1.2e-09 65.9 70 57.1
EL10Ac6g14592 Beta vulgaris HOM05D008354 ORTHO05D010055 1.6e-09 65.5 71 54.9
Psat7g058040 Pisum sativum HOM05D008354 ORTHO05D010055 3.0e-08 61.2 44 72.7
Migut.D01380 Erythranthe guttata HOM05D008354 ORTHO05D010055 5.1e-08 60.5 70 51.4
Gohir.D10G128050 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.1e-07 59.3 75 49.3
Nitab4.5_0002404g0010 Nicotiana tabacum HOM05D008354 ORTHO05D010055 4.3e-07 57.4 60 58.3
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 7.3e-07 56.6 60 60.0
CAN.G947.16 Capsicum annuum HOM05D001697 ORTHO05D001905 9.5e-07 56.2 55 61.8
MELO3C000043.2 Cucumis melo HOM05D008354 ORTHO05D010055 9.5e-07 56.2 60 60.0
Gohir.D02G108601 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.6e-06 54.3 68 47.1
Lsat_1_v5_gn_3_108780 Lactuca sativa HOM05D008354 ORTHO05D010055 3.6e-06 54.3 54 61.1
arahy.Tifrunner.gnm1.ann1.MY1TBE Arachis hypogaea HOM05D000388 ORTHO05D001540 8.1e-06 53.1 30 83.3


User provided reference genes

Program Settings