Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049371 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.5e-59 232.6 120 100.0
Gohir.A09G036865 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.5e-59 232.6 120 100.0
Gohir.A09G036900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.5e-59 232.6 120 100.0
Gorai.006G043500 Gossypium raimondii HOM05D007835 ORTHO05D008482 3.4e-59 231.5 120 99.2
Gohir.D09G038100 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.0e-58 229.9 120 98.3
Thecc.04G039400 Theobroma cacao HOM05D007835 ORTHO05D008482 1.8e-39 166.0 122 77.0
Duzib147G1374 Durio zibethinus HOM05D007835 ORTHO05D008482 3.3e-38 161.8 122 76.2
COL.COLO4_13280 Corchorus olitorius HOM05D007835 ORTHO05D008482 6.3e-37 157.5 124 75.0
Gohir.A05G337200 Gossypium hirsutum HOM05D007835 ORTHO05D008482 6.1e-32 141.0 110 70.0
Gohir.D07G237000 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.8e-31 139.4 111 69.4
Gorai.001G272900 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.8e-31 139.4 111 69.4
Gohir.A07G229800 Gossypium hirsutum HOM05D007835 ORTHO05D008482 2.3e-31 139.0 111 69.4
Gorai.012G085600 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.5e-30 136.3 110 68.2
Gohir.D04G075900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 4.4e-30 134.8 110 67.3
Potri.001G328300 Populus trichocarpa HOM05D007835 ORTHO05D008482 3.5e-27 125.2 121 59.5
Prupe.3G308000 Prunus persica HOM05D007835 ORTHO05D008482 1.1e-25 120.2 115 64.3
Manes.17G102100 Manihot esculenta HOM05D007835 ORTHO05D008482 5.5e-25 117.9 121 58.7
Atru.chr6.2588 Acer truncatum HOM05D007835 ORTHO05D008482 9.4e-25 117.1 127 59.1
Sabra16G0210200 Salix brachista HOM05D007835 ORTHO05D008482 2.7e-24 115.5 116 59.5
Potri.017G065916 Populus trichocarpa HOM05D007835 ORTHO05D008482 6.1e-24 114.4 111 56.8
CiPaw.03G057300 Carya illinoinensis HOM05D007835 ORTHO05D008482 8.0e-24 114.0 113 61.1
QL02p071044 Quercus lobata HOM05D007835 ORTHO05D008482 1.2e-22 110.2 117 57.3
Sabra17G0058300 Salix brachista HOM05D007835 ORTHO05D008482 3.3e-22 108.6 113 54.0
Eucgr.I01634 Eucalyptus grandis HOM05D007835 ORTHO05D008482 4.5e-19 98.2 118 55.1
Eucgr.I01635 Eucalyptus grandis HOM05D007835 ORTHO05D008482 7.7e-19 97.4 120 54.2
PGR142G0702 Punica granatum HOM05D007835 ORTHO05D008482 7.7e-19 97.4 123 53.7
Cfa007213 Carpinus fangiana HOM05D007835 ORTHO05D008482 1.3e-18 96.7 117 53.8
CiPaw.04G038800 Carya illinoinensis HOM05D007835 ORTHO05D008482 2.2e-18 95.9 128 50.0
GSVIVG01033066001 Vitis vinifera HOM05D007835 ORTHO05D008482 3.8e-18 95.1 112 52.7
Ciclev10017736m.g Citrus clementina HOM05D007835 ORTHO05D008482 1.1e-17 93.6 125 50.4
RcHm_v2.0_Chr2g0175871 Rosa chinensis HOM05D007835 ORTHO05D008482 2.5e-17 92.4 140 47.9
Actinidia05895 Actinidia chinensis HOM05D007835 ORTHO05D008482 3.2e-17 92.0 113 49.6
FAN02G2327 Fragaria x ananassa HOM05D007835 ORTHO05D008482 3.2e-17 92.0 138 45.7
FvH4_6g53750 Fragaria vesca HOM05D007835 ORTHO05D008482 1.6e-16 89.7 139 46.0
FAN05G3731 Fragaria x ananassa HOM05D007835 ORTHO05D008482 1.6e-16 89.7 139 46.0
FAN14G4618 Fragaria x ananassa HOM05D007835 ORTHO05D008482 1.6e-16 89.7 139 46.0
FAN09G2005 Fragaria x ananassa HOM05D007835 ORTHO05D008482 2.3e-15 85.9 136 44.9
Haze_14890 Corylus avellana HOM05D007835 ORTHO05D008482 3.0e-15 85.5 98 56.1
CANSAT64G0845 Cannabis sativa HOM05D007835 ORTHO05D008482 5.2e-15 84.7 144 44.4
Dinv33326 Davidia involucrata HOM05D007835 ORTHO05D008482 4.4e-14 81.6 125 49.6
TAR374G0487 Trochodendron aralioides HOM05D007835 ORTHO05D008482 2.2e-13 79.3 113 46.0
TWI34G1201 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 4.8e-13 78.2 114 50.9
Actinidia36209 Actinidia chinensis HOM05D007835 ORTHO05D008482 8.3e-13 77.4 109 45.9
Lalb_Chr00c01g0403701 Lupinus albus HOM05D007835 ORTHO05D008482 1.8e-12 76.3 115 44.3
TWI60G0136 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 3.1e-12 75.5 116 48.3
Aqoxy5G03319 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 4.1e-12 75.1 114 45.6
AUR62003426 Chenopodium quinoa HOM05D007835 ORTHO05D008482 4.1e-12 75.1 117 41.0
QL08p045526 Quercus lobata HOM05D007835 ORTHO05D008482 4.1e-12 75.1 106 46.2
TAR629G3113 Trochodendron aralioides HOM05D007835 ORTHO05D008482 7.0e-12 74.3 112 50.0
Lj1g0016807 Lotus japonicus HOM05D007835 ORTHO05D008482 7.7e-11 70.9 119 40.3
Ah.02g119850 Amaranthus hybridus HOM05D007835 ORTHO05D008482 1.3e-10 70.1 119 40.3
TAR371G0995 Trochodendron aralioides HOM05D007835 ORTHO05D008482 6.6e-10 67.8 112 49.1
DCAR_021801 Daucus carota HOM05D007835 ORTHO05D008482 8.6e-10 67.4 137 40.1
AUR62029415 Chenopodium quinoa HOM05D007835 ORTHO05D008482 2.5e-09 65.9 107 38.3
Glyma.19G093500 Glycine max HOM05D007835 ORTHO05D008482 7.2e-09 64.3 114 43.0
Sabra06G0213600 Salix brachista HOM05D007835 ORTHO05D008482 1.2e-08 63.5 75 53.3
Medtr7g028780 Medicago truncatula HOM05D007835 ORTHO05D008482 2.1e-08 62.8 117 41.9
Nn3g16421 Nelumbo nucifera HOM05D007835 ORTHO05D008482 6.1e-08 61.2 125 41.6
Phvul.001G092000 Phaseolus vulgaris HOM05D007835 ORTHO05D008482 1.0e-07 60.5 108 39.8
VMungo1383G1738 Vigna mungo HOM05D007835 ORTHO05D008482 1.8e-07 59.7 108 38.9
arahy.Tifrunner.gnm1.ann1.TA4SKR Arachis hypogaea HOM05D007835 ORTHO05D008482 3.0e-07 58.9 133 36.1
arahy.Tifrunner.gnm1.ann1.S4RYGS Arachis hypogaea HOM05D007835 ORTHO05D008482 4.0e-07 58.5 133 36.1
MBI07_g11278_MAGBIO Magnolia biondii HOM05D007835 ORTHO05D008482 4.0e-07 58.5 120 38.3
Oeu027438.1 Olea europaea HOM05D007835 ORTHO05D008482 8.9e-07 57.4 109 38.5
ATR0561G259 Amborella trichopoda HOM05D007835 ORTHO05D008482 1.2e-06 57.0 128 39.8
Sabra01G0042000 Salix brachista HOM05D019467 ORTHO05D008482 1.2e-06 57.0 108 36.1
Sp3g00150 Schrenkiella parvula HOM05D012696 ORTHO05D014743 1.2e-06 57.0 127 37.0
BraSC76t46615Z Brassica rapa HOM05D012696 ORTHO05D014743 2.0e-06 56.2 120 35.8


User provided reference genes

Program Settings