Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 9.1e-105 383.6 202 100.0
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 8.0e-93 344.0 202 87.6
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.8e-90 335.5 200 89.5
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 5.3e-89 331.3 200 89.0
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 5.5e-86 321.2 202 79.7
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.7e-77 291.6 180 87.8
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.7e-77 291.6 173 88.4
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 3.4e-67 258.8 200 72.0
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 3.0e-63 245.7 200 64.5
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 5.4e-57 224.9 202 63.4
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 2.6e-51 206.1 196 57.1
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 4.9e-50 201.8 200 50.5
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 1.1e-49 200.7 200 50.5
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 8.6e-47 191.0 173 59.5
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 3.3e-46 189.1 196 57.1
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 3.8e-42 175.6 196 46.9
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 4.9e-42 175.3 196 50.5
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 8.4e-42 174.5 200 48.0
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 1.4e-41 173.7 195 48.2
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 1.9e-41 173.3 205 52.7
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 2.4e-41 172.9 201 49.8
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 4.2e-41 172.2 192 54.7
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 1.2e-40 170.6 200 47.5
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 3.5e-40 169.1 204 44.6
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 7.8e-40 167.9 205 43.9
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 2.3e-39 166.4 189 52.4
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 5.1e-39 165.2 197 46.7
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 1.1e-38 164.1 195 51.8
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 1.9e-38 163.3 199 49.7
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 2.5e-38 162.9 198 44.9
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 5.6e-38 161.8 200 42.0
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 7.3e-38 161.4 200 48.0
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 7.3e-38 161.4 195 50.3
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 2.8e-37 159.5 160 53.8
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 2.8e-37 159.5 160 53.8
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 2.8e-37 159.5 160 53.8
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 2.8e-37 159.5 198 47.0
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 3.6e-37 159.1 161 53.4
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 4.8e-37 158.7 204 48.5
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 6.2e-37 158.3 186 51.1
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 1.1e-36 157.5 161 56.5
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 1.4e-36 157.1 200 43.0
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 5.3e-36 155.2 202 41.6
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 9.0e-36 154.5 204 49.5
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 9.0e-36 154.5 204 49.5
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 3.4e-35 152.5 201 46.3
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 3.4e-35 152.5 191 47.1
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 7.6e-35 151.4 198 46.0
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 9.9e-35 151.0 138 59.4
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 9.9e-35 151.0 163 54.6
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.3e-34 150.6 194 49.5
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 2.2e-34 149.8 142 61.3
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 2.9e-34 149.4 186 50.5
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 2.9e-34 149.4 190 47.4
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 3.8e-34 149.1 160 58.8
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.1e-33 147.5 140 57.1
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 1.9e-33 146.7 191 50.3
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 1.9e-33 146.7 161 55.9
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.9e-33 146.7 193 51.3
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 7.1e-33 144.8 147 56.5
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 9.3e-33 144.4 202 47.0
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 9.3e-33 144.4 171 53.2
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 1.2e-32 144.1 140 51.4
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 7.8e-32 141.4 146 56.2
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 7.8e-32 141.4 144 56.2
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 1.0e-31 141.0 167 49.7
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 1.0e-31 141.0 148 54.1
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.3e-31 140.6 207 44.9
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 2.3e-31 139.8 135 48.9
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 2.3e-31 139.8 160 49.4
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 6.6e-31 138.3 131 51.1
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 1.1e-30 137.5 138 52.9
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 1.5e-30 137.1 159 44.7
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 5.6e-30 135.2 166 46.4
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 7.3e-30 134.8 153 54.2
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 7.3e-30 134.8 178 44.4
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 9.6e-30 134.4 173 42.8
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 1.3e-29 134.0 191 39.3
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.6e-29 133.7 199 39.7
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 2.1e-29 133.3 177 49.2
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 2.1e-29 133.3 166 46.4
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 4.8e-29 132.1 149 53.0
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 6.2e-29 131.7 167 44.9
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 6.2e-29 131.7 148 51.4
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 6.9e-28 128.3 194 41.2
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 5.8e-27 125.2 144 50.7
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 7.6e-27 124.8 174 39.1
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 1.3e-26 124.0 189 43.9
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 1.6e-24 117.1 159 49.1
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 2.1e-24 116.7 156 48.1
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 3.0e-23 112.8 178 39.3
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 3.0e-23 112.8 146 49.3
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.5e-22 109.8 132 41.7
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 5.6e-22 108.6 108 47.2
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 1.4e-20 104.0 156 44.2
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.5e-19 100.5 139 34.5
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.0e-18 97.8 134 37.3
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 1.3e-18 97.4 137 46.0
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 3.8e-18 95.9 187 35.3
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 2.5e-17 93.2 161 37.3
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 7.1e-17 91.7 73 56.2
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 1.2e-16 90.9 146 42.5
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 4.6e-16 89.0 118 39.0
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 3.3e-14 82.8 104 43.3
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 7.6e-11 71.6 60 51.7
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.3e-10 70.9 62 48.4
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.5e-09 66.6 57 56.1
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 1.2e-08 64.3 85 41.2
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 3.5e-08 62.8 70 60.0


User provided reference genes

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