Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.8e-114 416.4 281 100.0
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 6.1e-91 338.2 250 83.6
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 7.9e-91 337.8 250 85.2
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.9e-52 210.3 252 68.3
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 7.0e-47 191.8 249 57.8
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 6.0e-38 162.2 254 59.1
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 1.0e-37 161.4 261 59.4
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 1.7e-37 160.6 249 61.4
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 3.9e-37 159.5 250 54.4
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 5.1e-37 159.1 252 62.3
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 6.6e-37 158.7 270 58.1
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 5.6e-36 155.6 267 58.8
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 1.2e-35 154.5 273 57.5
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.1e-35 153.7 254 60.2
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.1e-35 153.7 254 60.2
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 3.6e-35 152.9 249 56.6
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 8.1e-35 151.8 249 54.6
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 3.1e-34 149.8 273 54.9
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 6.8e-34 148.7 260 53.8
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 8.9e-34 148.3 255 52.2
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 2.6e-33 146.7 251 45.0
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 4.4e-33 146.0 267 58.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 9.9e-33 144.8 270 52.2
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 1.3e-32 144.4 257 51.8
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 1.7e-32 144.1 249 50.6
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 2.9e-32 143.3 258 58.9
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 3.8e-32 142.9 248 50.0
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 4.9e-32 142.5 257 43.2
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 8.4e-32 141.7 255 55.3
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 8.4e-32 141.7 249 55.4
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 1.1e-31 141.4 255 54.1
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 1.4e-31 141.0 254 57.1
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 1.4e-31 141.0 257 57.2
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.9e-31 140.6 261 57.9
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 2.4e-31 140.2 260 57.7
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 3.2e-31 139.8 259 57.1
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 4.1e-31 139.4 258 58.1
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 5.4e-31 139.0 254 55.1
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 7.1e-31 138.7 269 54.6
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.2e-30 137.9 272 54.0
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 1.6e-30 137.5 250 58.8
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.6e-30 136.0 251 56.2
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 6.0e-30 135.6 244 51.6
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 6.0e-30 135.6 248 50.0
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 6.0e-30 135.6 255 57.6
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 6.0e-30 135.6 279 52.3
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 7.8e-30 135.2 279 54.1
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 1.0e-29 134.8 277 52.7
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.0e-29 134.8 260 56.2
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.0e-29 134.8 247 55.1
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.7e-29 134.0 255 56.9
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 2.3e-29 133.7 244 50.0
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.3e-29 133.7 276 54.0
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 5.1e-29 132.5 245 50.2
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 5.1e-29 132.5 249 51.8
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 6.6e-29 132.1 253 52.6
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 6.6e-29 132.1 256 56.6
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 8.7e-29 131.7 290 52.4
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.1e-28 131.3 249 56.2
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 1.1e-28 131.3 253 53.0
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.1e-28 131.3 266 51.1
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.5e-28 131.0 245 54.7
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.5e-28 131.0 262 50.8
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 3.3e-28 129.8 249 54.2
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 3.3e-28 129.8 249 54.2
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 1.2e-27 127.9 238 58.0
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 8.1e-27 125.2 267 55.1
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 2.4e-26 123.6 271 52.0
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 2.4e-26 123.6 280 50.4
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 5.2e-26 122.5 245 52.7
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 5.2e-26 122.5 259 51.4
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 6.9e-26 122.1 250 54.0
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 2.0e-25 120.6 260 54.6
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 2.6e-25 120.2 256 54.3
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 4.4e-25 119.4 260 53.8
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 1.3e-24 117.9 277 49.5
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 4.9e-24 115.9 244 54.5
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 4.9e-24 115.9 244 54.5
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 6.4e-24 115.5 259 48.3
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 8.4e-24 115.2 270 48.1
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.9e-23 114.0 300 48.7
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 3.2e-23 113.2 273 36.6
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 1.6e-22 110.9 293 44.7
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.6e-22 110.9 255 37.3
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.3e-21 107.8 251 37.1
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 1.7e-21 107.5 277 47.7
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.5e-20 104.4 249 44.2
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 3.3e-20 103.2 255 47.5
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 7.3e-20 102.1 264 46.2
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.4e-18 97.8 292 42.5
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 2.0e-17 94.0 254 39.0
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 1.7e-16 90.9 77 67.5
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 2.9e-16 90.1 86 57.0
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 1.4e-15 87.8 245 50.2
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 2.3e-13 80.5 127 42.5
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 5.6e-12 75.9 369 35.5
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 7.4e-12 75.5 106 50.9
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.3e-11 74.7 71 52.1
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 2.1e-11 73.9 73 53.4
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 6.2e-11 72.4 45 77.8
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 2.4e-10 70.5 302 33.4
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.2e-09 68.2 70 58.6
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.5e-09 67.8 70 58.6
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 4.5e-09 66.2 296 42.6
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.3e-08 64.7 79 46.8
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 8.4e-08 62.0 59 57.6
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 4.2e-07 59.7 75 45.3
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 5.5e-07 59.3 66 51.5


User provided reference genes

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