Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 8.9e-218 760.0 386 100.0
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.9e-207 725.7 386 95.1
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 7.1e-207 723.8 386 95.1
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.1e-180 636.7 396 81.8
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 5.9e-161 571.2 411 73.7
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 3.2e-159 565.5 393 75.3
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 8.5e-144 514.2 389 68.6
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 4.7e-142 508.4 397 68.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 3.0e-141 505.8 373 69.2
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 5.2e-141 505.0 391 67.3
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 9.7e-140 500.7 377 67.1
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 8.2e-139 497.7 377 67.9
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 7.7e-137 491.1 389 65.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.1e-135 487.3 373 67.6
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 3.2e-135 485.7 389 65.8
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 9.4e-135 484.2 393 63.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 2.7e-134 482.6 398 64.1
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 3.6e-134 482.3 398 64.3
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 5.2e-133 478.4 325 76.0
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.2e-132 477.2 374 66.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.4e-132 475.7 379 66.2
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 7.5e-132 474.6 339 70.5
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 2.8e-131 472.6 385 62.6
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.4e-130 469.5 390 60.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 5.4e-130 468.4 397 61.7
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.6e-129 466.8 365 66.0
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.5e-129 465.7 369 64.8
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 7.7e-129 464.5 393 62.1
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 8.6e-128 461.1 367 65.9
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.1e-127 460.7 393 60.1
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.5e-127 459.5 393 62.1
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 7.2e-127 458.0 382 64.1
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 7.2e-127 458.0 382 60.2
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.2e-126 457.2 398 60.8
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.6e-126 456.8 388 61.6
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 6.1e-126 454.9 397 58.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.0e-125 454.1 380 64.2
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.0e-125 452.6 386 60.1
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 3.0e-125 452.6 349 64.8
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.5e-124 450.3 383 60.1
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.0e-124 449.9 372 60.5
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.6e-124 449.5 363 64.5
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.7e-123 446.8 383 59.3
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 7.8e-121 438.0 375 61.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.3e-120 437.2 370 62.7
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 6.6e-120 434.9 388 60.6
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 8.6e-120 434.5 376 60.6
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.1e-119 434.1 375 61.1
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.5e-119 433.7 441 55.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.9e-119 433.3 372 61.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 5.6e-119 431.8 379 59.4
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.6e-119 431.8 371 62.8
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 5.6e-119 431.8 373 60.3
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.2e-116 424.1 356 62.1
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.2e-116 424.1 389 56.6
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.2e-116 424.1 368 59.8
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.2e-116 424.1 368 60.3
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 3.4e-116 422.5 361 60.4
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.3e-115 420.6 358 61.7
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.3e-115 420.6 378 60.1
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.9e-115 419.5 362 60.2
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.9e-115 419.5 368 60.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.9e-115 419.5 347 61.7
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.7e-115 419.1 361 60.9
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 6.4e-115 418.3 361 60.7
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.1e-114 417.5 358 61.5
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.8e-114 416.8 352 61.6
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.8e-114 416.8 358 59.2
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 5.4e-114 415.2 388 57.0
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 5.4e-114 415.2 378 59.3
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 7.0e-114 414.8 358 60.3
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.0e-113 413.3 360 58.6
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 4.6e-113 412.1 361 59.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 7.8e-113 411.4 290 70.7
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 6.6e-112 408.3 359 59.9
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 8.6e-112 407.9 358 60.3
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 3.3e-111 406.0 358 60.1
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 7.3e-111 404.8 358 59.8
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 3.1e-109 399.4 384 53.1
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.4e-108 396.0 324 62.7
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 3.4e-108 396.0 379 55.1
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 5.8e-108 395.2 297 66.3
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.4e-106 390.6 343 60.1
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 7.3e-103 378.3 246 76.0
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 9.5e-103 377.9 380 55.0
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-102 377.5 298 66.4
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.6e-102 377.1 272 68.0
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 3.6e-102 375.9 365 54.8
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.7e-102 375.6 358 54.7
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.0e-101 372.5 358 54.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.4e-100 369.4 383 53.3
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.1e-98 364.4 274 65.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.4e-93 347.4 275 62.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 4.4e-92 342.4 408 48.5
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 5.8e-92 342.0 236 70.8
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.1e-90 337.8 234 73.1
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 5.1e-88 328.9 310 57.4
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.9e-87 327.0 258 67.1
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.8e-85 320.5 291 56.7
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 8.4e-83 311.6 208 72.6
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.9e-82 310.5 360 48.6
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.3e-80 303.5 336 51.8
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 3.0e-80 303.1 321 50.2
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 2.4e-77 293.5 302 50.7
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 3.4e-76 289.7 297 53.9
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.9e-75 286.6 171 79.5
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.4e-53 214.5 244 48.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 6.9e-53 212.2 189 61.9
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 6.9e-45 185.7 170 56.5
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 7.2e-42 175.6 401 33.4
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.1e-39 168.3 205 46.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.8e-37 161.0 142 59.9
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.9e-34 151.0 205 41.5
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.6e-33 146.7 155 52.3
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 2.0e-31 141.0 108 68.5
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 6.5e-27 125.9 71 85.9
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 4.2e-10 70.1 55 60.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 7.2e-10 69.3 67 50.7


User provided reference genes

Program Settings