Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G173840 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.6e-74 282.7 147 100.0
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.7e-32 141.4 132 63.6
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 2.1e-26 122.9 131 60.3
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 3.6e-26 122.1 131 58.8
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 3.6e-26 122.1 132 58.3
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 6.1e-26 121.3 132 58.3
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 3.4e-24 115.5 131 57.3
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 2.8e-23 112.5 132 56.1
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 2.5e-19 99.4 133 50.4
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 9.5e-19 97.4 126 51.6
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.0e-17 94.0 151 43.7
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 1.8e-17 93.2 133 48.9
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 1.5e-16 90.1 133 48.1
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 9.8e-16 87.4 151 41.7
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 9.8e-16 87.4 134 49.3
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 1.3e-15 87.0 137 48.9
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 4.9e-15 85.1 132 47.7
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 3.1e-14 82.4 136 45.6
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 4.1e-14 82.0 134 45.5
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 9.2e-14 80.9 134 44.8
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.2e-13 80.5 137 46.7
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 1.2e-13 80.5 154 40.9
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 3.5e-13 79.0 161 37.9
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 4.5e-13 78.6 133 43.6
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 5.9e-13 78.2 148 37.8
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 7.8e-13 77.8 130 41.5
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 1.7e-12 76.6 161 41.6
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 2.3e-12 76.3 142 44.4
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 2.9e-12 75.9 157 38.2
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 2.9e-12 75.9 157 38.2
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 2.9e-12 75.9 162 37.7
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 3.8e-12 75.5 130 42.3
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 8.6e-12 74.3 142 45.1
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 8.6e-12 74.3 150 37.3
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 2.5e-11 72.8 137 35.8
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 3.3e-11 72.4 137 42.3
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 4.3e-11 72.0 126 43.7
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 4.3e-11 72.0 155 40.0
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 7.3e-11 71.2 130 40.8
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 1.2e-10 70.5 144 39.6
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 2.1e-10 69.7 150 40.0
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 3.6e-10 68.9 117 47.0
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 6.1e-10 68.2 147 38.8
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 8.0e-10 67.8 133 41.4
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.0e-09 67.4 136 39.0
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.4e-09 67.0 150 38.7
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 1.4e-09 67.0 154 39.0
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 2.3e-09 66.2 128 42.2
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 3.1e-09 65.9 136 40.4
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 3.1e-09 65.9 155 38.7
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 3.1e-09 65.9 134 43.3
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 4.0e-09 65.5 134 41.0
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 4.0e-09 65.5 156 36.5
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 4.0e-09 65.5 146 34.9
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 6.8e-09 64.7 148 36.5
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 2.0e-08 63.2 124 37.1
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 2.0e-08 63.2 154 37.7
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 2.0e-08 63.2 160 35.6
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.6e-08 62.8 138 41.3
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 4.4e-08 62.0 143 37.1
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 5.8e-08 61.6 135 37.0
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 5.8e-08 61.6 161 34.2
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 5.8e-08 61.6 161 34.2
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 7.5e-08 61.2 139 43.2
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 7.5e-08 61.2 127 37.8
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 1.3e-07 60.5 169 30.8
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 1.7e-07 60.1 151 37.1
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 1.7e-07 60.1 104 46.2
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 2.2e-07 59.7 90 42.2
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 2.2e-07 59.7 137 40.1
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 3.7e-07 58.9 126 40.5
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 8.3e-07 57.8 155 34.2
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 1.4e-06 57.0 138 37.7
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 1.4e-06 57.0 128 40.6
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 3.2e-06 55.8 158 32.9
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 4.1e-06 55.5 151 33.8
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 5.4e-06 55.1 137 41.6


User provided reference genes

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