Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 2.7e-98 362.1 191 100.0
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 4.0e-94 348.2 191 96.3
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 3.7e-92 341.7 191 95.3
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 4.3e-72 275.0 194 80.9
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 8.4e-68 260.8 195 79.0
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 1.4e-67 260.0 186 80.6
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 4.0e-62 241.9 192 72.4
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 4.5e-61 238.4 187 72.2
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 5.8e-61 238.0 193 71.5
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.9e-59 233.0 192 69.8
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 2.4e-59 232.6 193 68.9
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 1.3e-57 226.9 193 66.3
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 3.0e-57 225.7 230 60.0
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 5.1e-57 224.9 191 67.5
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 3.3e-56 222.2 192 65.6
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 6.2e-55 218.0 192 67.2
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 1.1e-54 217.2 199 64.8
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 4.0e-54 215.3 194 64.9
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 6.9e-54 214.5 193 64.8
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 9.0e-54 214.2 193 65.3
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.2e-53 213.8 168 69.6
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 1.2e-53 213.8 165 72.7
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 2.6e-53 212.6 165 71.5
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 5.8e-53 211.5 183 69.4
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 5.8e-53 211.5 196 66.8
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.2e-52 209.5 168 69.0
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 2.9e-52 209.1 162 73.5
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 2.9e-52 209.1 150 77.3
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 6.5e-52 208.0 195 65.6
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 1.1e-51 207.2 179 67.0
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 1.9e-51 206.5 168 72.0
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 5.5e-51 204.9 190 65.3
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 9.3e-51 204.1 191 61.8
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.6e-50 203.4 192 66.7
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 2.1e-50 203.0 186 62.4
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 2.1e-50 203.0 150 73.3
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 3.5e-50 202.2 192 66.1
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 3.5e-50 202.2 150 74.0
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 7.9e-50 201.1 159 74.2
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 7.9e-50 201.1 183 65.0
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 7.9e-50 201.1 174 68.4
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 1.0e-49 200.7 166 67.5
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 1.0e-49 200.7 199 61.3
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.3e-49 200.3 147 78.9
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.8e-49 199.9 151 78.1
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 3.0e-49 199.1 167 68.9
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 6.7e-49 198.0 194 62.4
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.7e-49 198.0 190 65.3
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 8.7e-49 197.6 143 74.1
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 1.1e-48 197.2 186 62.9
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.9e-48 196.4 152 73.0
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 1.9e-48 196.4 196 64.8
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 2.5e-48 196.1 206 62.1
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 3.3e-48 195.7 187 61.5
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 3.3e-48 195.7 143 74.1
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.7e-48 194.9 220 57.7
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 7.4e-48 194.5 125 83.2
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.3e-47 193.7 122 80.3
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 1.6e-47 193.4 195 58.5
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 8.2e-47 191.0 172 64.5
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 3.1e-46 189.1 193 59.6
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 9.0e-46 187.6 160 67.5
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.0e-45 186.4 125 79.2
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.4e-45 185.7 205 59.5
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 7.6e-45 184.5 196 58.7
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 7.6e-45 184.5 196 58.7
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 7.6e-45 184.5 196 58.7
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 7.6e-45 184.5 169 63.3
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 1.3e-44 183.7 197 60.4
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.7e-44 183.3 206 60.7
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 2.2e-44 183.0 201 58.7
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 2.2e-44 183.0 182 62.6
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 2.9e-44 182.6 162 64.8
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 3.8e-44 182.2 144 69.4
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 5.0e-44 181.8 160 65.0
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 5.0e-44 181.8 156 64.7
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 6.5e-44 181.4 191 58.6
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.9e-43 179.9 153 68.6
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.2e-43 179.1 205 57.1
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 7.2e-43 177.9 202 58.9
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 9.3e-43 177.6 195 58.5
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 2.7e-42 176.0 121 79.3
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 2.7e-42 176.0 194 57.7
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 1.3e-41 173.7 123 77.2
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 1.3e-41 173.7 204 55.4
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 7.4e-40 167.9 143 64.3
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 4.1e-38 162.2 144 63.2
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 5.3e-38 161.8 180 56.7
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 9.1e-38 161.0 98 83.7
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.7e-36 156.8 184 56.5
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 1.7e-36 156.8 142 65.5
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 6.5e-36 154.8 87 87.4
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.1e-35 154.1 100 81.0
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 1.9e-35 153.3 161 56.5
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 1.0e-33 147.5 207 50.7
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 1.0e-33 147.5 207 50.7
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 1.2e-29 134.0 193 47.2
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 2.9e-28 129.4 124 62.1
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 5.0e-28 128.6 159 54.7
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 1.6e-26 123.6 97 69.1
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 4.7e-26 122.1 197 44.2
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 1.8e-25 120.2 151 52.3
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 5.2e-25 118.6 124 58.9
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 6.7e-25 118.2 107 64.5
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 6.7e-25 118.2 120 59.2
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.3e-24 115.9 83 73.5
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.1e-22 109.0 81 72.8
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.1e-22 109.0 81 72.8
Duzib130G0001 Durio zibethinus HOM05D006899 ORTHO05D008566 2.0e-21 106.7 94 70.2
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 9.4e-19 97.8 142 42.3
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.8e-17 93.6 110 50.9
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 4.0e-17 92.4 133 45.9
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 2.6e-16 89.7 121 44.6
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 8.2e-15 84.7 80 60.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 5.0e-12 75.5 90 53.3
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 2.0e-08 63.5 69 42.0


User provided reference genes

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